RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 LRBAP50851 2863 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 USP9YO00507 2555 aaPredicted RBP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 IGHV4-30-2A0A087WSY4 118 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 FAM240BA0A1B0GVZ2 78 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 hADV38S2A0JD32 116 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 NAP1L6A6NFF2 107 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 PCP4L1A6NKN8 68 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 C12orf77C9JDV5 145 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 FABP7O15540 132 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 PHF1O43189 567 aaPredicted RBP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 SPINT2O43291 252 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 HSPA12AO43301 675 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 FCN3O75636 299 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 SCAF4O95104 1147 aaKnown RBP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 IGHV2-5P01817 119 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 PF4P02776 101 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 CD74P04233 296 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 HEXAP06865 529 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 OR5H8P0DN80 308 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 TBPP20226 339 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 IL2RGP31785 369 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 CEACAM6P40199 344 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 NPY4RP50391 375 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 CCR6P51684 374 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 HLA-DRB3P79483 266 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 PAX5Q02548 391 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 MEF2CQ06413 473 aaPredicted RBP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 MEF2DQ14814 521 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 CDK10Q15131 360 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 HMGN3Q15651 99 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 SRSF7Q16629 238 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 LTC4SQ16873 150 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 SCGB2B2Q4G0G5 96 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 ACTBL2Q562R1 376 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 ESCO2Q56NI9 601 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 WDR25Q64LD2 544 aaPredicted RBP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 TMEM200BQ69YZ2 307 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 TRAT1Q6PIZ9 186 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 ZNF841Q6ZN19 808 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 Q6ZS49 121 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 TMEM17Q86X19 198 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 LRRC75A-AS1Q8N1F1 130 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 GAPTQ8N292 157 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 OR51S1Q8NGJ8 323 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 OR4A4PQ8NGN8 299 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 OR1L1Q8NH94 360 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 OR10J5Q8NHC4 309 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 CLDND2Q8NHS1 167 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 LHFPL5Q8TAF8 219 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 DEDD2Q8WXF8 326 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 GALMQ96C23 342 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 SLC6A7Q99884 636 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 C7orf50Q9BRJ6 194 aaKnown RBP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 GINS4Q9BRT9 223 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 SSBP3Q9BWW4 388 aaPredicted RBP4.28□□□□□ -1.72
LINC02408-202ENST00000538573 C19orf12Q9NSK7 152 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 SLC35D1Q9NTN3 355 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 LPAR3Q9UBY5 353 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 SCP2D1Q9UJQ7 156 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 DSCAML1Q8TD84 2053 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 ARID1AO14497 2285 aa4.28□□□□□ -1.72
LINC02408-202ENST00000538573 LOC105371242A0A075B767 164 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 TRBV23-1A0A0A0MS06 115 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 IGHV3-43A0A0B4J1X8 118 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 PPIAL4CA0A0B4J2A2 164 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 IGHV4-61A0A0C4DH41 118 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 IGKV1-6A0A0C4DH72 117 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 KBTBD11-OT1A0A1B0GTJ5 212 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 SERTM2A0A1B0GWG4 89 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 ZNF729A6NN14 1252 aaPredicted RBP4.27□□□□□ -1.73
LINC02408-202ENST00000538573 VWC2LB2RUY7 222 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 C15orf65H3BRN8 121 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 RGS13O14921 159 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 HBZP02008 142 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 CTXN2P0C2S0 81 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 ZNF735P0CB33 412 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 ZNF728P0DKX0 622 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 PPIAL4GP0DN37 164 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 IGHV3-43DP0DP04 118 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 SPNP16150 400 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 SLC25A16P16260 332 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 CCL3L1P16619 93 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 RAB4AP20338 218 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 USF1P22415 310 aaPredicted RBP4.27□□□□□ -1.73
LINC02408-202ENST00000538573 NFYAP23511 347 aaPredicted RBP4.27□□□□□ -1.73
LINC02408-202ENST00000538573 OMGP23515 440 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 ZBTB25P24278 435 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 NFYBP25208 207 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 FCGR2CP31995 323 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 SSTR5P35346 364 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 RAB4BP61018 213 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 LMO4P61968 165 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 LCN2P80188 198 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 ZNF273Q14593 569 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 HERPUD1Q15011 391 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 C17orf58Q2M2W7 97 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 Q5PR19 223 aa4.27□□□□□ -1.73
LINC02408-202ENST00000538573 VAX1Q5SQQ9 334 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms