RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 RD3LP0DJH9 198 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 OR13C7P0DN81 318 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 AADACP22760 399 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 PIGPP57054 158 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 NHLH2Q02577 135 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 TNP2Q05952 138 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 NCMAPQ5T1S8 102 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 C20orf204Q6ZNR8 217 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 HSD17B11Q8NBQ5 300 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 OR52M1Q8NGK5 317 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 CD300LFQ8TDQ1 290 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 MOB3AQ96BX8 217 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 FAM212BQ9NTI7 297 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-210ENST00000538120 SLC25A15Q9Y619 301 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 POMT1Q9Y6A1 747 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 XKRY2A2RUG3 117 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 MLNRO43193 412 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 TUSC2O75896 110 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 SCTP09683 121 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 PPP1CCP36873 323 aaKnown RBP9.08□□□□□ -0.96
CLIP1-210ENST00000538120 GLP1RP43220 463 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 SULT1A1P50225 295 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 UCP3P55916 312 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 FXYD4P59646 89 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 ZNF154Q13106 437 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 HERPUD1Q15011 391 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 ZNF324BQ6AW86 544 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-210ENST00000538120 SLC24A4Q8NFF2 622 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 MRPL30Q8TCC3 161 aaKnown RBP9.08□□□□□ -0.96
CLIP1-210ENST00000538120 METTL1Q9UBP6 276 aaKnown RBP9.08□□□□□ -0.96
CLIP1-210ENST00000538120 MGAQ8IWI9 3026 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 IGHV2OR16-5A0A0B4J2B6 119 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 IGKV1-6A0A0C4DH72 117 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 HS3ST1O14792 307 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 IFNA21P01568 189 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 PRH1P02810 166 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 SELEP16581 610 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 GRNP28799 593 aaKnown RBP9.07□□□□□ -0.96
CLIP1-210ENST00000538120 PHLDA2Q53GA4 152 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 GTF3AQ92664 365 aaKnown RBP9.07□□□□□ -0.96
CLIP1-210ENST00000538120 RARRES2Q99969 163 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 SCNM1Q9BWG6 230 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 ARV1Q9H2C2 271 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 OBP2BQ9NPH6 170 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 TRBV6-6A0A0A6YYG2 114 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 IGHV3-64DA0A0J9YX35 117 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 MKRN2OSH3BPM6 223 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 CDIPTO14735 213 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 PGA5P0DJD9 388 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 TIMP3P35625 211 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 ZNF880Q6PDB4 577 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 Q6ZR03 302 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 SPACA3Q8IXA5 215 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 C11orf53Q8IXP5 236 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 OR8G5Q8NG78 346 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 OR11L1Q8NGX0 322 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 RDH5Q92781 318 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 NAA60Q9H7X0 242 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 C19orf12Q9NSK7 152 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 BOD1L1Q8NFC6 3051 aa9.07□□□□□ -0.96
CLIP1-210ENST00000538120 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 TRDCB7Z8K6 153 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 PPYP01298 95 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 KITLGP21583 273 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 CEACAM8P31997 349 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-210ENST00000538120 TMEM187Q14656 261 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 OR8G1Q15617 311 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 FAM57AQ8TBR7 257 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 RTN4IP1Q8WWV3 396 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-210ENST00000538120 ABHD14AQ9BUJ0 271 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 OR51M1Q9H341 326 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 FZR1Q9UM11 496 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 TP53TG5Q9Y2B4 290 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 TMEM210A6NLX4 147 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 E5RGE8 158 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 DEGS1O15121 323 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 PPIHO43447 177 aaKnown RBP9.06□□□□□ -0.96
CLIP1-210ENST00000538120 PTBP3O95758 552 aaKnown RBP9.06□□□□□ -0.96
CLIP1-210ENST00000538120 IGHV2-70P01814 119 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 GRPP07492 148 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 SEC11BP0C7V7 166 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 CCL20P78556 96 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 HMGN3Q15651 99 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 MSMPQ1L6U9 139 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 TMEM182Q6ZP80 229 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-210ENST00000538120 Q8NA96 180 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 NEK7Q8TDX7 302 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 GALNT14Q96FL9 552 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 GINS3Q9BRX5 216 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 TUBA4BQ9H853 241 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 PLEKHA2Q9HB19 425 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 SLC2A9Q9NRM0 540 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 NSG2Q9Y328 171 aa9.06□□□□□ -0.96
CLIP1-210ENST00000538120 PUS1Q9Y606 427 aaKnown RBP eCLIP9.06□□□□□ -0.96
CLIP1-210ENST00000538120 YIF1AO95070 293 aa9.05□□□□□ -0.96
CLIP1-210ENST00000538120 CD33P20138 364 aa9.05□□□□□ -0.96
CLIP1-210ENST00000538120 GNRHRP30968 328 aa9.05□□□□□ -0.96
CLIP1-210ENST00000538120 P2RY1P47900 373 aa9.05□□□□□ -0.96
CLIP1-210ENST00000538120 TDGF1P3P51864 188 aa9.05□□□□□ -0.96
CLIP1-210ENST00000538120 SPCS3P61009 180 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms