RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 HEATR5BQ9P2D3 2071 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-213ENST00000537002 OR5B21A6NL26 309 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 CXCL1P09341 107 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 RTP5Q14D33 572 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM252Q8N6L7 170 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 CHRDL1Q9BU40 450 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 STRADBQ9C0K7 418 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 MRPL18Q9H0U6 180 aaKnown RBP4.69□□□□□ -1.66
PTPRD-213ENST00000537002 TOMM40O96008 361 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 CEACAM5P06731 702 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 ICAM4Q14773 271 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM97Q5BJF2 176 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 PSMG4Q5JS54 123 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM230Q96A57 120 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 WFDC1Q9HC57 220 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 PLSCR2Q9NRY7 297 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 NUP210Q8TEM1 1887 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-213ENST00000537002 FAM53BQ14153 422 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 ATG4DQ86TL0 474 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-213ENST00000537002 ZNF547Q8IVP9 402 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 OR13H1Q8NG92 308 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 OR1N1Q8NGS0 311 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 PLPPR2Q96GM1 343 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 RTL8AQ9BWD3 113 aa4.69□□□□□ -1.66
PTPRD-213ENST00000537002 A0A096LPE4 126 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 A0A1W2PPZ6 126 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 DHHO43323 396 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 OR4A8P0C604 315 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 HTR1DP28221 377 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 Q1RN00 199 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 FAM89BQ8N5H3 189 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 WNT16Q9UBV4 365 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SSUH2Q9Y2M2 353 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 COL4A5P29400 1685 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 A0A1B0GV72 72 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 C5orf49A4QMS7 147 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 DEFB108AA8MXU0 73 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PLPP3O14495 311 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PDE6DO43924 150 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 COX7A2P2O60397 106 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 HAND1O96004 215 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 RIPPLY3P57055 190 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 ZNF77Q15935 545 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 RNF133Q8WVZ7 376 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 OR2D2Q9H210 308 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 IGHV1-69-2A0A0G2JMI3 117 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 NRG2O14511 850 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PPYP01298 95 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 ZDHHC23Q8IYP9 409 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 RSPO3Q9BXY4 272 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 WNT10AQ9GZT5 417 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 RIMS4Q9H426 269 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 RALYQ9UKM9 306 aaKnown RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PLXNA4Q9HCM2 1894 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SCN10AQ9Y5Y9 1956 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PLXNA2O75051 1894 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 CTXND1A0A1B0GTU2 59 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 A6NCN8 305 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 ENSAO43768 121 aaKnown RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PDCD6O75340 191 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SCGB2A1O75556 95 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 IGHMP01871 453 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 OR10S1Q8NGN2 331 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 ST8SIA1Q92185 356 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 TECRQ9NZ01 308 aaKnown RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 ZNF391Q9UJN7 358 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 A0A087WV48 116 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 K7EQM0 130 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 NDUFB4O95168 129 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PSG2P11465 335 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 FKBP2P26885 142 aaKnown RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 RBX1P62877 108 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SUPT4H1P63272 117 aaKnown RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 CENPVQ7Z7K6 275 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 OR4C12Q96R67 309 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 MAP1LC3CQ9BXW4 147 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 AKIRIN1Q9H9L7 192 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 GLRX2Q9NS18 164 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 HS3ST3B1Q9Y662 390 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PLXNB3Q9ULL4 1909 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 KIF26BQ2KJY2 2108 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 HRKO00198 91 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 CA2P00918 260 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PFN1P07737 140 aaKnown RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 ASAH2BP0C7U1 165 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SRFP11831 508 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SELENOVP59797 346 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PIGYQ3MUY2 71 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 PRSS3P2Q8NHM4 247 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 ASB10Q8WXI3 467 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 ST6GALNAC6Q969X2 333 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 GABRG3Q99928 467 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 RTBDNQ9BSG5 229 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 A0A0U1RQV5 110 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 TIMM8AO60220 97 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SCGB1C2P0DMR2 95 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SLC37A2Q8TED4 501 aa4.68□□□□□ -1.66
PTPRD-213ENST00000537002 SLC7A10Q9NS82 523 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms