RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 EIF4G1Q04637 1599 aaKnown RBP2.61□□□□□ -1.99
PRKDC-208ENST00000536710 SHROOM3Q8TF72 1996 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 SDHAF1A6NFY7 115 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 COCHO43405 550 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 LINC00614P0C842 121 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 HIST1H1CP16403 213 aaKnown RBP2.6□□□□□ -1.99
PRKDC-208ENST00000536710 GZMMP51124 257 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 SLC35A2P78381 396 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 MEF2BQ02080 365 aaPredicted RBP2.6□□□□□ -1.99
PRKDC-208ENST00000536710 MESTQ5EB52 335 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 DNM1P34Q6PK57 102 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 ATP5L2Q7Z4Y8 100 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 OR8K1Q8NGG5 319 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 OR51H1Q8NH63 302 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 TLCD1Q96CP7 247 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 EIF5A2Q9GZV4 153 aaKnown RBP2.6□□□□□ -1.99
PRKDC-208ENST00000536710 MED28Q9H204 178 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 LRRC19Q9H756 370 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 PARVAQ9NVD7 372 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 ALG5Q9Y673 324 aa2.6□□□□□ -1.99
PRKDC-208ENST00000536710 NACADO15069 1562 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 A0A0A6YYH2 397 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 A6NJ64 397 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 G3V3Q6 166 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 COPEO14579 308 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 AZIN1O14977 448 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 CRTAPO75718 401 aaPredicted RBP2.59□□□□□ -1.99
PRKDC-208ENST00000536710 LGALS3P17931 250 aaKnown RBP2.59□□□□□ -1.99
PRKDC-208ENST00000536710 OR1E2P47887 323 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 H2BFSP57053 126 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 Q6ZRU5 148 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 TMEM251Q8N6I4 163 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 ZFAND2AQ8N6M9 145 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 CCDC112Q8NEF3 446 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 OR5C1Q8NGR4 320 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 DDI1Q8WTU0 396 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 CMTM5Q96DZ9 223 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 ACY3Q96HD9 319 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 PLEKHJ1Q9NW61 149 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 TP53TG1Q9Y2A0 90 aa2.59□□□□□ -1.99
PRKDC-208ENST00000536710 LOC102725191A0A1B0GVB3 256 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 TINCRA0A1B0GVN0 87 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 LINC00862A6NCI5 91 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 CRYBA1P05813 215 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 NQO1P15559 274 aaKnown RBP2.58□□□□□ -2
PRKDC-208ENST00000536710 IFNGR2P38484 337 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 RPL14P50914 215 aaKnown RBP2.58□□□□□ -2
PRKDC-208ENST00000536710 TNFRSF9Q07011 255 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 SMARCD3Q6STE5 483 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 FAM151BQ6UXP7 276 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
PRKDC-208ENST00000536710 DNAAF3Q8N9W5 541 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 OR10P1Q8NGE3 313 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 OR2V1Q8NHB1 315 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 GPR119Q8TDV5 335 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 OR7D2Q96RA2 312 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 TIPINQ9BVW5 301 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 MS4A6AQ9H2W1 248 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 NKIRAS1Q9NYS0 192 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 MTCH2Q9Y6C9 303 aa2.58□□□□□ -2
PRKDC-208ENST00000536710 BIRC5O15392 142 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 COILP38432 576 aaPredicted RBP2.57□□□□□ -2
PRKDC-208ENST00000536710 HSPA9P38646 679 aaKnown RBP2.57□□□□□ -2
PRKDC-208ENST00000536710 HPCAP84074 193 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 PSG4Q00888 419 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 SPIN4Q56A73 249 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 SLC37A2Q8TED4 501 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 SMIM19Q96E16 107 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 MGLLQ99685 303 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 SLC22A4Q9H015 551 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 NSRP1Q9H0G5 558 aaKnown RBP2.57□□□□□ -2
PRKDC-208ENST00000536710 MRPS16Q9Y3D3 137 aaKnown RBP2.57□□□□□ -2
PRKDC-208ENST00000536710 HDGFL3Q9Y3E1 203 aa2.57□□□□□ -2
PRKDC-208ENST00000536710 F5H768 121 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 DEDDO75618 318 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 PSMG1O95456 288 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 CBR1P16152 277 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 CDK2P24941 298 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 HTR4Q13639 388 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 LRRC26Q2I0M4 334 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
PRKDC-208ENST00000536710 SDIM1Q6ZPB5 146 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 CCDC121Q6ZUS5 278 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 OR4K13Q8NH42 304 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 OR10D3Q8NH80 312 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 KCTD7Q96MP8 289 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 OR51B6Q9H340 312 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 HSPE1-MOB4S4R3N1 261 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 UNC13AQ9UPW8 1703 aa2.56□□□□□ -2
PRKDC-208ENST00000536710 C17orf98A8MV24 154 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 MRASO14807 208 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 ZNF73O43830 326 aaPredicted RBP2.55□□□□□ -2
PRKDC-208ENST00000536710 ATP5G1P05496 136 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 CPMP14384 443 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 CXCL2P19875 107 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 CXCL3P19876 107 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 MIPP30301 263 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 LPAR6P43657 344 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 EMP2P54851 167 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 LINC00313P59037 77 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms