RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 RANBP1P43487 201 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 PRR20EP86478 221 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 PRR20CP86479 221 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 PRR20DP86480 221 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 PRR20BP86481 221 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 PRR20AP86496 221 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 CFHR3Q02985 330 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 ACSM3Q53FZ2 586 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 RBM48Q5RL73 367 aaKnown RBP10.29□□□□□ -0.76
RTN3-207ENST00000536011 C9orf66Q5T8R8 295 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 SIGIRRQ6IA17 410 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 FAM71F2Q6NXP2 309 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 TMEM65Q6PI78 240 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 LCNL1Q6ZST4 164 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 MOB1BQ7L9L4 216 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 KCTD7Q96MP8 289 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 YPEL2Q96QA6 119 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 HSPB9Q9BQS6 159 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 FKBP14Q9NWM8 211 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 KIAA1456Q9P272 454 aa10.29□□□□□ -0.76
RTN3-207ENST00000536011 NBR2O15453 112 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 HLA-DRB1P01911 266 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 CDK1P06493 297 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 SLC2A2P11168 524 aaPredicted RBP10.28□□□□□ -0.76
RTN3-207ENST00000536011 PSMB8P28062 276 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 CHATP28329 748 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 VHLP40337 213 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 F2RL1P55085 397 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 ACTBP60709 375 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 RPS27AP62979 156 aaKnown RBP10.28□□□□□ -0.76
RTN3-207ENST00000536011 GNMTQ14749 295 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 HSD17B12Q53GQ0 312 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 C6orf141Q5SZD1 244 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 LAIR2Q6ISS4 152 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 ZNF833PQ6ZTB9 187 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 OR52L2PQ8NGH6 319 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 DUX3Q96PT4 197 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 TMED9Q9BVK6 235 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 GHITMQ9H3K2 345 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 RIMS4Q9H426 269 aaPredicted RBP10.28□□□□□ -0.76
RTN3-207ENST00000536011 CHMP1AQ9HD42 196 aaPredicted RBP10.28□□□□□ -0.76
RTN3-207ENST00000536011 SCN3BQ9NY72 215 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 PIPOXQ9P0Z9 390 aa10.28□□□□□ -0.76
RTN3-207ENST00000536011 BPNT1O95861 308 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 VSIG8P0DPA2 414 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 HTR2CP28335 458 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 SPHARQ15513 63 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 HMGN3Q15651 99 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 DEFB136Q30KP8 78 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 C1orf100Q5SVJ3 147 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 OR6M1Q8NGM8 313 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 IL1F10Q8WWZ1 152 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 UFD1Q92890 307 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 UBE2E2Q96LR5 201 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 NABP2Q9BQ15 211 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 SULT4A1Q9BR01 284 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 MRPL20Q9BYC9 149 aaKnown RBP10.27□□□□□ -0.77
RTN3-207ENST00000536011 PARP11Q9NR21 331 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 MGAT4AQ9UM21 535 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
RTN3-207ENST00000536011 SAA2-SAA4A0A096LPE2 208 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 SEC14L6B5MCN3 397 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 PTGES3LE9PB15 166 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 RAB29O14966 203 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 SLC22A1O15245 554 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 OR8U8P0C7N1 319 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 SAA2P0DJI9 122 aaPredicted RBP10.26□□□□□ -0.77
RTN3-207ENST00000536011 SRMP19623 302 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 FHL3Q13643 280 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 MED22Q15528 200 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 TRAM1Q15629 374 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 C5orf64Q2M2E5 130 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 C6orf201Q7Z4U5 140 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 CEACAM19Q7Z692 300 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 LRRTM1Q86UE6 522 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 ODF3L1Q8IXM7 274 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 SVOPQ8N4V2 548 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 URM1Q9BTM9 101 aaKnown RBP10.26□□□□□ -0.77
RTN3-207ENST00000536011 FAAP24Q9BTP7 215 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 TM2D1Q9BX74 207 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 OR51J1Q9H342 316 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 PLEKHJ1Q9NW61 149 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 VSIG4Q9Y279 399 aa10.26□□□□□ -0.77
RTN3-207ENST00000536011 TRAV41A0A0B4J266 112 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 ERICH4A6NGS2 130 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 OR5H14A6NHG9 310 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 ARL6IP5O75915 188 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 NAPSAO96009 420 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 UCHL1P09936 223 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 NHLRC4P0CG21 123 aaPredicted RBP10.25□□□□□ -0.77
RTN3-207ENST00000536011 PSMA1P25786 263 aaKnown RBP10.25□□□□□ -0.77
RTN3-207ENST00000536011 BLVRBP30043 206 aaPredicted RBP10.25□□□□□ -0.77
RTN3-207ENST00000536011 MC5RP33032 325 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 OR3A3P47888 321 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 INSL3P51460 131 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 LUMP51884 338 aaPredicted RBP10.25□□□□□ -0.77
RTN3-207ENST00000536011 RUNX1Q01196 453 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 INSL4Q14641 139 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 PLGLAQ15195 96 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms