RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 KCNG3Q8TAE7 436 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 DUX3Q96PT4 197 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 HSPB9Q9BQS6 159 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 SULT4A1Q9BR01 284 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 FAAP24Q9BTP7 215 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 ZMAT5Q9UDW3 170 aaKnown RBP12.71□□□□□ -0.37
CLSTN3-204ENST00000535313 OR5H8P0DN80 308 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 SLC2A2P11168 524 aaPredicted RBP12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 HTR2CP28335 458 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 CDX1P47902 265 aaPredicted RBP12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 LY6G6FQ5SQ64 297 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 LCNL1Q6ZST4 164 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 C6orf201Q7Z4U5 140 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 RNF152Q8N8N0 203 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 OR2AK2Q8NG84 335 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 OR8U1Q8NH10 309 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 UFD1Q92890 307 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 RAX2Q96IS3 184 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 CYYR1Q96J86 154 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 ZNF251Q9BRH9 671 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 MRPL20Q9BYC9 149 aaKnown RBP12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 VCX3BQ9H321 246 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 STEAP1Q9UHE8 339 aa12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 ZNF107Q9UII5 783 aaPredicted RBP12.7□□□□□ -0.38
CLSTN3-204ENST00000535313 IGF1P05019 195 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 ACTBP60709 375 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 KIR2DS1Q14954 304 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 HMGN3Q15651 99 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 C5orf24Q7Z6I8 188 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 ODF3L1Q8IXM7 274 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 IL1F10Q8WWZ1 152 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 KCTD7Q96MP8 289 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 ZNF580Q9UK33 172 aa12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 LSM2Q9Y333 95 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-204ENST00000535313 SLC22A1O15245 554 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 BPNT1O95861 308 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 IGHG4P01861 327 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 UCHL1P09936 223 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 BLVRBP30043 206 aaPredicted RBP12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 OR3A3P47888 321 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 CFHR3Q02985 330 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 UNC119Q13432 240 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 DEFB136Q30KP8 78 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 LIPKQ5VXJ0 399 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 ZNF833PQ6ZTB9 187 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 OR6M1Q8NGM8 313 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 SETD6Q8TBK2 473 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 NABP2Q9BQ15 211 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 CHCHD6Q9BRQ6 235 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 NICN1Q9BSH3 213 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 TM2D1Q9BX74 207 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 PLEKHJ1Q9NW61 149 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 RAB26Q9ULW5 256 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 TPRKBQ9Y3C4 175 aa12.68□□□□□ -0.38
CLSTN3-204ENST00000535313 SAA2-SAA4A0A096LPE2 208 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 TMEM14DPA8MWL7 114 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 NBR2O15453 112 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 HSMCR30P0CW71 290 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 SAA2P0DJI9 122 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 DGCR2P98153 550 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 DCTN2Q13561 401 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 FAM71F2Q6NXP2 309 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 TMEM65Q6PI78 240 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 MOB1BQ7L9L4 216 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 SVOPQ8N4V2 548 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 TMEM203Q969S6 136 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 URM1Q9BTM9 101 aaKnown RBP12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 RIMS4Q9H426 269 aaPredicted RBP12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 KCNK15Q9H427 330 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 PLGRKTQ9HBL7 147 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 PIPOXQ9P0Z9 390 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 KIAA1456Q9P272 454 aa12.67□□□□□ -0.38
CLSTN3-204ENST00000535313 NAPSAO96009 420 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 CD37P11049 281 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 PSMB8P28062 276 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 HSPA13P48723 471 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 QRFPP83859 136 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 IRF3Q14653 427 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 TRAM1Q15629 374 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 VAX1Q5SQQ9 334 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 C4orf3Q8WVX3 66 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 RITA1Q96K30 269 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 IFI27L2Q9H2X8 130 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 OR51J1Q9H342 316 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 PARP11Q9NR21 331 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 SLC23A1Q9UHI7 598 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 WSB1Q9Y6I7 421 aa12.66□□□□□ -0.38
CLSTN3-204ENST00000535313 RAB29O14966 203 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 ST8SIA5O15466 376 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 DENRO43583 198 aaKnown RBP12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 RGS10O43665 173 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 ARL6IP5O75915 188 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 HLA-DRB1P01911 266 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 ARSBP15848 533 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 CNTFRP26992 372 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms