RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 MBPP02686 304 aaPredicted RBP11□□□□□ -0.65
SPG11-203ENST00000535302 CXCL3P19876 107 aa11□□□□□ -0.65
SPG11-203ENST00000535302 FXYD3Q14802 87 aa11□□□□□ -0.65
SPG11-203ENST00000535302 MUC21A0A0G2JKD1 596 aa11□□□□□ -0.65
SPG11-203ENST00000535302 MUC21A0A140T8X8 626 aa11□□□□□ -0.65
SPG11-203ENST00000535302 PRB3Q04118 309 aaPredicted RBP11□□□□□ -0.65
SPG11-203ENST00000535302 MUC21Q5SSG8 566 aa11□□□□□ -0.65
SPG11-203ENST00000535302 RECKO95980 971 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 GP1BAP07359 652 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 CTSBP07858 339 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 ST6GALNAC3Q8NDV1 305 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 ST6GAL2Q96JF0 529 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 DOCK5Q9H7D0 1870 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 PRSS23O95084 383 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 TGIF1Q15583 401 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 LINC00299Q6ZSB3 139 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 TMEM38BQ9NVV0 291 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 NEU3Q9UQ49 428 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 A0A1B0GV72 72 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 HMGA2P52926 109 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 GHITMQ9H3K2 345 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 ZNF665Q9H7R5 613 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 SYNGR2O43760 224 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 SS18L1O75177 396 aaPredicted RBP10.99□□□□□ -0.65
SPG11-203ENST00000535302 ID1P41134 155 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 EBLN2Q6P2I7 272 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 PRSS54Q6PEW0 395 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 HIST1H1EP10412 219 aaKnown RBP10.99□□□□□ -0.65
SPG11-203ENST00000535302 PERPQ96FX8 193 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 Q9N2K0 584 aa10.99□□□□□ -0.65
SPG11-203ENST00000535302 C7orf71A4D174 169 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 MEIG1Q5JSS6 88 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 CARFQ8N187 725 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 J3QR06 171 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 VDAC1P21796 283 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 KIR3DL2P43630 455 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 TMEM167BQ9NRX6 74 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 COL18A1P39060 1754 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 A0A1W2PQD3 144 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 M0R143 59 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 OR2A4O95047 310 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 PMS2CLQ68D20 193 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 CD300LDQ6UXZ3 194 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 RHOVQ96L33 236 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 OR2A7Q96R45 310 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 IL13RA2Q14627 380 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 DEGS2Q6QHC5 323 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 CALHM1Q8IU99 346 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 BVESQ8NE79 360 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 RPS4Y2Q8TD47 263 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 ASB5Q8WWX0 329 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 DUX5Q96PT3 197 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 DUSP15Q9H1R2 295 aaPredicted RBP10.98□□□□□ -0.65
SPG11-203ENST00000535302 HIGD1AQ9Y241 93 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 DEDDO75618 318 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 CYB5R3P00387 301 aaPredicted RBP10.98□□□□□ -0.65
SPG11-203ENST00000535302 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
SPG11-203ENST00000535302 PAXXQ9BUH6 204 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 MANBALQ9NQG1 85 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 ARAP2Q8WZ64 1704 aa10.98□□□□□ -0.65
SPG11-203ENST00000535302 SLC35E3Q7Z769 313 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 HIST1H4GQ99525 98 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 DIRC3C9JPN6 131 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 C16orf97H3BN30 126 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 WDR25Q64LD2 544 aaPredicted RBP10.97□□□□□ -0.65
SPG11-203ENST00000535302 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 ATG101Q9BSB4 218 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 V9GYH0 126 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 PPYP01298 95 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 ZNF735P0CB33 412 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 HIST1H1BP16401 226 aaKnown RBP10.97□□□□□ -0.65
SPG11-203ENST00000535302 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 MIXL1Q9H2W2 232 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 SVILO95425 2214 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 LMX1BO60663 402 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 TMEM50BP56557 158 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 RUNX1Q01196 453 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 ZNF826PQ6ZT77 177 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 VKORC1L1Q8N0U8 176 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 TMEM171Q8WVE6 324 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 WDFY2Q96P53 400 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 SOX21Q9Y651 276 aaPredicted RBP10.97□□□□□ -0.65
SPG11-203ENST00000535302 A0A1B0GU03 582 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 FCGR3AP08637 254 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 MAS1LP35410 378 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 ISXQ2M1V0 245 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 STPG1Q5TH74 334 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 METTL1Q9UBP6 276 aaKnown RBP10.97□□□□□ -0.65
SPG11-203ENST00000535302 TMEM189A5PLL7 270 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 COX6B1P14854 86 aa10.97□□□□□ -0.65
SPG11-203ENST00000535302 SF3B5Q9BWJ5 86 aaKnown RBP10.97□□□□□ -0.65
SPG11-203ENST00000535302 C21orf140B9A014 251 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 OGG1O15527 345 aa10.96□□□□□ -0.65
SPG11-203ENST00000535302 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.65
SPG11-203ENST00000535302 TPRP12270 2363 aaKnown RBP10.96□□□□□ -0.65
SPG11-203ENST00000535302 CTSDP07339 412 aaPredicted RBP10.96□□□□□ -0.65
SPG11-203ENST00000535302 FAM3BP58499 235 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms