RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ZNF420	Q8TAQ5	688 aa	Predicted RBP	2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	KLF14	Q8TD94	323 aa	Predicted RBP	2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	DCUN1D4	Q92564	292 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	EXOSC8	Q96B26	276 aa	Known RBP	2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	TM4SF18	Q96CE8	201 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	DDIT4L	Q96D03	193 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	FCRL1	Q96LA6	429 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	CHP1	Q99653	195 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	SH3GL1	Q99961	368 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	CTPS2	Q9NRF8	586 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	ABCB10	Q9NRK6	738 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	ATP6V1D	Q9Y5K8	247 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442	CDH10	Q9Y6N8	788 aa		2.97	□□□□□ -1.93
ECHDC1-223	ENST00000534442		H3BSA7	217 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PDYN	P01213	254 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IFNA10	P01566	189 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KRT6A	P02538	564 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FGF4	P08620	206 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ZNF19	P17023	458 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FUT3	P21217	361 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC2A5	P22732	501 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GABRR1	P24046	479 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CD1B	P29016	333 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TFPI2	P48307	235 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CAV2	P51636	162 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ARFRP1	Q13795	201 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KIR2DS1	Q14954	304 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TSN	Q15631	228 aa	Known RBP	2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	LY6G6F	Q5SQ64	297 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FAM201A	Q5SY85	155 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	LCE3C	Q5T5A8	94 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OTP	Q5XKR4	325 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GRINA	Q7Z429	371 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	COMMD6	Q7Z4G1	85 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	LHFPL3	Q86UP9	236 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PUSL1	Q8N0Z8	303 aa	Known RBP	2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442		Q8N7P7	452 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CDRT4	Q8N9R6	151 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C15orf53	Q8NAA6	179 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C20orf203	Q8NBC4	194 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR1S2	Q8NGQ3	325 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR2G2	Q8NGZ5	317 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC25A40	Q8TBP6	338 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TMEM101	Q96IK0	257 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	RARRES2	Q99969	163 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR2J1	Q9GZK6	312 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	METTL8	Q9H825	291 aa	Known RBP	2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC25A22	Q9H936	323 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	POFUT2	Q9Y2G5	429 aa		2.96	□□□□□ -1.94
ECHDC1-223	ENST00000534442	MUC12	Q9UKN1	5478 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442		M0R3G1	203 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NDUFA2	O43678	99 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ENTPD5	O75356	428 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FGG	P02679	453 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IFI6	P09912	130 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PRPS2	P11908	318 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	MARCKSL1	P49006	195 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SRP9	P49458	86 aa	Known RBP	2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NCBP2	P52298	156 aa	Known RBP eCLIP	2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	AQP5	P55064	265 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	KRTAP10-6	P60371	365 aa	Predicted RBP	2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SKP2	Q13309	424 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR7A5	Q15622	319 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PAGE3	Q5JUK9	113 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SPANXN2	Q5MJ10	180 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CCNJ	Q5T5M9	372 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	RSBN1	Q5VWQ0	802 aa	Predicted RBP	2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ARL9	Q6T311	187 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442		Q6ZR03	302 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	DPPA2	Q7Z7J5	298 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TMEM61	Q8N0U2	210 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	COMMD1	Q8N668	190 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR4C5	Q8NGB2	326 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	FANK1	Q8TC84	345 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	STMN2	Q93045	179 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SLC38A4	Q969I6	547 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	MCUR1	Q96AQ8	359 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	ATP5S	Q99766	215 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR51M1	Q9H341	326 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	GOLPH3	Q9H4A6	298 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	REEP1	Q9H902	201 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SIAE	Q9HAT2	523 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	PLGRKT	Q9HBL7	147 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CCL28	Q9NRJ3	127 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C20orf96	Q9NUD7	363 aa	Predicted RBP	2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	XCL2	Q9UBD3	114 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TP53TG3	Q9ULZ0	132 aa		2.95	□□□□□ -1.94
ECHDC1-223	ENST00000534442	TMED7-TICAM2	A0A0A6YYA0	188 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	IGKV1D-13	A0A0B4J2D9	117 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SMCO3	A2RU48	225 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	C12orf71	A8MTZ7	269 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442		M0R1W7	72 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	CCRL2	O00421	344 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	RAB29	O14966	203 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	LSM1	O15116	133 aa	Known RBP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	EIF3H	O15372	352 aa	Known RBP eCLIP	2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SOX15	O60248	233 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	SCN2B	O60939	215 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	NPIPB7	O75200	414 aa		2.94	□□□□□ -1.94
ECHDC1-223	ENST00000534442	OR2J3	O76001	311 aa		2.94	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms