RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 OR6N2Q8NGY6 317 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 CASTOR1Q8WTX7 329 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 SKA2Q8WVK7 121 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TNFAIP8L1Q8WVP5 186 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 IL1F10Q8WWZ1 152 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TAF15Q92804 592 aaKnown RBP eCLIP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 OXGR1Q96P68 337 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 C20orf144Q9BQM9 153 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 MS4A8Q9BY19 250 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TLNRD1Q9H1K6 362 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 PATZ1Q9HBE1 687 aaKnown RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ASF1BQ9NVP2 202 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM38BQ9NVV0 291 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 EHFQ9NZC4 300 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 MARCOQ9UEW3 520 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 JPT1Q9UK76 154 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 HHLA2Q9UM44 414 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 FARSAQ9Y285 508 aaKnown RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ORC6Q9Y5N6 252 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 DCHS1Q96JQ0 3298 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 CFAP47Q6ZTR5 3102 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 IGHV3OR16-12A0A075B7B8 117 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TRAV19A0A0A6YYK7 116 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 IGSF23A1L1A6 192 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ARL5CA6NH57 179 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR5B21A6NL26 309 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 IDSB3KWA1 339 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 G3V3Q6 166 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 H0Y980 276 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 NTN3O00634 580 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 GNG7O60262 68 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 S1PR2O95136 353 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 LYPD3O95274 346 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 FABP4P15090 132 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SHC1P29353 583 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 LEPP41159 167 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TNFSF9P41273 254 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 PIGPP57054 158 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 HILS1P60008 231 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 RPL32P62910 135 aaKnown RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 FABP5Q01469 135 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TCP10Q12799 353 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 EBPQ15125 230 aaKnown RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM255AQ5JRV8 349 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM69Q5SWH9 247 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM42Q69YG0 159 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR10K2Q6IF99 312 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 EPGNQ6UW88 154 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 MBOAT2Q6ZWT7 520 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SLC36A1Q7Z2H8 476 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SPICQ8N5J4 248 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 C2orf73Q8N5S3 287 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SLC35G3Q8N808 338 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR51S1Q8NGJ8 323 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 FLVCR1-AS1Q8TAF5 88 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 CANT1Q8WVQ1 401 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF689Q96CS4 500 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SIGMAR1Q99720 223 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 NUDT9Q9BW91 350 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR51E2Q9H255 320 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 UBE2ZQ9H832 354 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 PLEKHA1Q9HB21 404 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 EXOSC3Q9NQT5 275 aaKnown RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SLC2A6Q9UGQ3 507 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 MOB4Q9Y3A3 225 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 DOPEY1Q5JWR5 2465 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 IGHV2OR16-5A0A0B4J2B6 119 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TVP23AA6NH52 213 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 UPK1AO00322 258 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 RBFOX2O43251 390 aaKnown RBP eCLIP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 COX5AP20674 150 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 NFYBP25208 207 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 PSMA1P25786 263 aaKnown RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SDC2P34741 201 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ATP4BP51164 291 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ARHGAP11BQ3KRB8 267 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 TPTE2P1Q5T6R2 138 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 BCL2L15Q5TBC7 163 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SDHAF4Q5VUM1 108 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 WDR74Q6RFH5 385 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 DUX4L9Q6RFH8 374 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF705AQ6ZN79 300 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 C6orf120Q7Z4R8 191 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 NIT1Q86X76 327 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 RIMKLAQ8IXN7 391 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 GPR26Q8NDV2 337 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 SLC30A7Q8NEW0 376 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR4K5Q8NGD3 323 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR9I1Q8NGQ6 314 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR1J4Q8NGS1 313 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR2A12Q8NGT7 310 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR51Q1Q8NH59 317 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 MRAPQ8TCY5 172 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 ACER1Q8TDN7 264 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 EEF1AKMT1Q8WVE0 214 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 FAM151AQ8WW52 585 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 OR8D1Q8WZ84 308 aa2.78□□□□□ -1.96
CSMD3-210ENST00000534172 RERGQ96A58 199 aaPredicted RBP2.78□□□□□ -1.96
CSMD3-210ENST00000534172 GPR146Q96CH1 333 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms