RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 PACRGLQ8N7B6 248 aa16.45■□□□□ 0.22
SSH3-211ENST00000534112 NPBQ8NG41 125 aa16.45■□□□□ 0.22
SSH3-211ENST00000534112 OR52L2PQ8NGH6 319 aa16.45■□□□□ 0.22
SSH3-211ENST00000534112 MRPS24Q96EL2 167 aaKnown RBP16.45■□□□□ 0.22
SSH3-211ENST00000534112 TM2D3Q9BRN9 247 aa16.45■□□□□ 0.22
SSH3-211ENST00000534112 SMPD3Q9NY59 655 aaPredicted RBP16.45■□□□□ 0.22
SSH3-211ENST00000534112 NKX1-2Q9UD57 310 aaPredicted RBP16.45■□□□□ 0.22
SSH3-211ENST00000534112 ERGIC3Q9Y282 383 aa16.45■□□□□ 0.22
SSH3-211ENST00000534112 CA11O75493 328 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 SC5DO75845 299 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 PPP1CCP36873 323 aaKnown RBP16.44■□□□□ 0.22
SSH3-211ENST00000534112 NDPQ00604 133 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 ECSCRQ19T08 205 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 C19orf54Q5BKX5 351 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 GLIPR1L1Q6UWM5 242 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 C5orf24Q7Z6I8 188 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 OR13C5Q8NGS8 318 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 CASTOR1Q8WTX7 329 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 MUL1Q969V5 352 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 FGF20Q9NP95 211 aaPredicted RBP16.44■□□□□ 0.22
SSH3-211ENST00000534112 MBNL3Q9NUK0 354 aaKnown RBP16.44■□□□□ 0.22
SSH3-211ENST00000534112 MRPS28Q9Y2Q9 187 aaKnown RBP16.44■□□□□ 0.22
SSH3-211ENST00000534112 FBXO7Q9Y3I1 522 aa16.44■□□□□ 0.22
SSH3-211ENST00000534112 IGHV4OR15-8A0A075B7B6 117 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 A0A087WW49 117 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 A0A1W2PN81 502 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 OGG1O15527 345 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 GPX5O75715 221 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 NDUFA3O95167 84 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 LGALS1P09382 135 aaKnown RBP16.43■□□□□ 0.22
SSH3-211ENST00000534112 OR8U9P0C7N5 309 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 CHRNA7P36544 502 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 OR3A3P47888 321 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 ETV1P50549 477 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 SRSF7Q16629 238 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSH3-211ENST00000534112 OR2G6Q5TZ20 316 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 ZNF833PQ6ZTB9 187 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 CYYR1Q96J86 154 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 CST11Q9H112 138 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 KCNIP1Q9NZI2 227 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 KIAA1456Q9P272 454 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 CKLFQ9UBR5 152 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 JPT1Q9UK76 154 aa16.43■□□□□ 0.22
SSH3-211ENST00000534112 FOXA2Q9Y261 457 aaPredicted RBP16.43■□□□□ 0.22
SSH3-211ENST00000534112 TRAV8-7A0A075B6U6 113 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 TRBV5-5A0A0J9YX44 114 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 LOC100130705A0A1B0GUX0 176 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 UBE2QL1A1L167 161 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 LDLRAD4O15165 306 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 GLAP06280 429 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 FUT3P21217 361 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 CRIP2P52943 208 aaPredicted RBP16.42■□□□□ 0.22
SSH3-211ENST00000534112 ZNF660Q6AZW8 331 aaPredicted RBP16.42■□□□□ 0.22
SSH3-211ENST00000534112 TMPRSS11AQ6ZMR5 421 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 ZNF554Q86TJ5 538 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 JAGN1Q8N5M9 183 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 APH1BQ8WW43 257 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 GHSRQ92847 366 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 SMIM19Q96E16 107 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 OR4C12Q96R67 309 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 BANF2Q9H503 90 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 BABAM2Q9NXR7 383 aa16.42■□□□□ 0.22
SSH3-211ENST00000534112 IGHV4-30-4P0DP06 118 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 CX3CL1P78423 397 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 HTD2P86397 168 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 SIGIRRQ6IA17 410 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 Q8N1Y9 231 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 TCTEX1D1Q8N7M0 179 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 SELENOIQ9C0D9 397 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 EDA2RQ9HAV5 297 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 NUBP2Q9Y5Y2 271 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 A3GALT2U3KPV4 340 aa16.41■□□□□ 0.22
SSH3-211ENST00000534112 SAA2-SAA4A0A096LPE2 208 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 FAM90A7PA6NKC0 464 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 FAM90A23PA8MXZ1 464 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 YPEL1O60688 119 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 HSPB1P04792 205 aaKnown RBP16.4■□□□□ 0.22
SSH3-211ENST00000534112 SAA2P0DJI9 122 aaPredicted RBP16.4■□□□□ 0.22
SSH3-211ENST00000534112 EGR2P11161 476 aaPredicted RBP16.4■□□□□ 0.22
SSH3-211ENST00000534112 DCKP27707 260 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 PITPNAQ00169 270 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 SMN1Q16637 294 aaKnown RBP16.4■□□□□ 0.22
SSH3-211ENST00000534112 LY6G6FQ5SQ64 297 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 ISOC1Q96CN7 298 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 FLYWCH2Q96CP2 140 aaKnown RBP16.4■□□□□ 0.22
SSH3-211ENST00000534112 YPEL2Q96QA6 119 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 FBXL15Q9H469 300 aa16.4■□□□□ 0.22
SSH3-211ENST00000534112 FCN1O00602 326 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 RGS11O94810 467 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 LALBAP00709 142 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 IGHV3-11P01762 117 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 MAS1P04201 325 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 MGMTP16455 207 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 RPS11P62280 158 aaKnown RBP eCLIP16.39■□□□□ 0.21
SSH3-211ENST00000534112 Q499Y3 187 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 DMKNQ6E0U4 476 aaPredicted RBP16.39■□□□□ 0.21
SSH3-211ENST00000534112 AWAT2Q6E213 333 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 HAPLN4Q86UW8 402 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 ZNF555Q8NEP9 628 aa16.39■□□□□ 0.21
SSH3-211ENST00000534112 MRPL30Q8TCC3 161 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms