RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 GADD45AP24522 165 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 CDK2P24941 298 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PSMB8P28062 276 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 OTX1P32242 354 aaPredicted RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SOX6P35712 828 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 DDOSTP39656 456 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 REG1BP48304 166 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 RFX2P48378 723 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 RAB9AP51151 201 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 F2RL1P55085 397 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SNU13P55769 128 aaKnown RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF121P58317 390 aaPredicted RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ADARB1P78563 741 aaKnown RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 BDH1Q02338 343 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 MXD1Q05195 221 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 IL18R1Q13478 541 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 EIF2B1Q14232 305 aaKnown RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 MED22Q15528 200 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZFP69Q49AA0 526 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PYDC2Q56P42 97 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PIK3CD-AS1Q5SR53 167 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF691Q5VV52 312 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SMARCD3Q6STE5 483 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 DRAM2Q6UX65 266 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF730Q6ZMV8 503 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PLEKHG7Q6ZR37 379 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 MSANTD1Q6ZTZ1 278 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 MBOAT2Q6ZWT7 520 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 TMEM179BQ7Z7N9 219 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 MOB3BQ86TA1 216 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 LYPD6Q86Y78 171 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 CALHM1Q8IU99 346 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 FOXRED2Q8IWF2 684 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF561Q8N587 486 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ASCC1Q8N9N2 400 aaKnown RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 Q8N9W7 124 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 MINDY2Q8NBR6 621 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 TMEM116Q8NCL8 245 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 OR6Q1Q8NGQ2 317 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF671Q8TAW3 534 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 TMEM163Q8TC26 289 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ENKURQ8TC29 256 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PHLDA1Q8WV24 401 aaPredicted RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SLAMF6Q96DU3 332 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 HARBI1Q96MB7 349 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF714Q96N38 554 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ERMAPQ96PL5 475 aaPredicted RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 OR4C12Q96R67 309 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 AMELYQ99218 206 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SH3GL1Q99961 368 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 YTHDF1Q9BYJ9 559 aaKnown RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 DCSTAMPQ9H295 470 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF556Q9HAH1 456 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PLSCR3Q9NRY6 295 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 IL36RNQ9UBH0 155 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ABCD2Q9UBJ2 740 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SAMD4AQ9UPU9 718 aaKnown RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SLC22A13Q9Y226 551 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 VSIG4Q9Y279 399 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SIGLEC7Q9Y286 467 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 A0A0A0MQY5 61 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TRAV39A0A0B4J263 110 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 A0A1W2PPI3 338 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CCDC182A6NF36 153 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 NUPR2A6NF83 97 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CBY3A6NI87 242 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM183AA6NL82 134 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TMEM210A6NLX4 147 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM25AB3EWG3 89 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM25CB3EWG5 89 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM25GB3EWG6 89 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 LOC110117498-PIK3R3F6TDL0 507 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 LINC01619G3V211 115 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF701M0R085 212 aaPredicted RBP2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TNFRSF11BO00300 401 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TOR1AO14656 332 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 MYL12BO14950 172 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 HSPA12AO43301 675 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 XRCC2O43543 280 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 SOX15O60248 233 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CCNB2O95067 398 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 NXPH2O95156 264 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 NDUFB2O95178 105 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CNIH1O95406 144 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TXNDC12O95881 172 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 GYPBP06028 91 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 OR8U9P0C7N5 309 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CLUP10909 449 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 EDN2P20800 178 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 NFYBP25208 207 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 CRABP1P29762 137 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 RRM2P31350 389 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 TNFSF8P32971 234 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 HAAOP46952 286 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 GLIPR1P48060 266 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 HCCSP53701 268 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 ERVFC1-1P60608 527 aa2.21□□□□□ -2.06
CHMP4A-208ENST00000534106 ISL1P61371 349 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms