RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 NKAIN3Q8N8D7 197 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 DRAXINQ8NBI3 349 aaPredicted RBP7.56□□□□□ -1.2
SSBP3-215ENST00000533946 IL1F10Q8WWZ1 152 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 PHYHIPQ92561 330 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 CREB3L1Q96BA8 519 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 MRPS24Q96EL2 167 aaKnown RBP7.56□□□□□ -1.2
SSBP3-215ENST00000533946 S1PR3Q99500 378 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 TMEM59Q9BXS4 323 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 PECRQ9BY49 303 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 KLK15Q9H2R5 256 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 ACOT13Q9NPJ3 140 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 AURKAIP1Q9NWT8 199 aaPredicted RBP7.56□□□□□ -1.2
SSBP3-215ENST00000533946 ZNF107Q9UII5 783 aaPredicted RBP7.56□□□□□ -1.2
SSBP3-215ENST00000533946 GAB2Q9UQC2 676 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 TPRKBQ9Y3C4 175 aa7.56□□□□□ -1.2
SSBP3-215ENST00000533946 SAA2-SAA4A0A096LPE2 208 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 FAM90A10PA6NDY2 464 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 FAM90A7PA6NKC0 464 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 FAM90A23PA8MXZ1 464 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 K7EIL1 84 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 SLC17A2O00624 439 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 SPINT2O43291 252 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 CLEC2LP0C7M8 214 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 SAA2P0DJI9 122 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-215ENST00000533946 RPL23AP62750 156 aaKnown RBP7.55□□□□□ -1.2
SSBP3-215ENST00000533946 CFHR3Q02985 330 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 KIAA0141Q14154 515 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-215ENST00000533946 GLT8D1Q68CQ7 371 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 CCDC144NLQ6NUI1 221 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 SLC16A12Q6ZSM3 486 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 OR2W3Q7Z3T1 314 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 SLC35E3Q7Z769 313 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 TGIF2LXQ8IUE1 241 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 MRPL41Q8IXM3 137 aaKnown RBP7.55□□□□□ -1.2
SSBP3-215ENST00000533946 STPG2Q8N412 459 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 FAM71E2Q8N5Q1 922 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 C8orf31Q8N9H6 132 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 WFDC9Q8NEX5 89 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 RAX2Q96IS3 184 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 VCXQ9H320 206 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 ZNF230Q9UIE0 474 aaPredicted RBP7.55□□□□□ -1.2
SSBP3-215ENST00000533946 WSB1Q9Y6I7 421 aa7.55□□□□□ -1.2
SSBP3-215ENST00000533946 KMT2CQ8NEZ4 4911 aaKnown RBP7.55□□□□□ -1.2
SSBP3-215ENST00000533946 BPNT1O95861 308 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 MOSP00540 346 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 CT45A6P0DMU7 189 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 CT45A5P0DMU8 189 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 CT45A7P0DMV0 189 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 MAPK3P27361 379 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-215ENST00000533946 CD1BP29016 333 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 TGFBR1P36897 503 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 RAB11BQ15907 218 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 C6orf183Q5T699 404 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 C22orf42Q6IC83 251 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 ZNF833PQ6ZTB9 187 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 SPARTQ8N0X7 666 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 OR6M1Q8NGM8 313 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 OR2T10Q8NGZ9 312 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 KCNG3Q8TAE7 436 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 FAM3DQ96BQ1 224 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 NEDD4LQ96PU5 975 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 AGMATQ9BSE5 352 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 ABHD14AQ9BUJ0 271 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 C11orf54Q9H0W9 315 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-215ENST00000533946 CST11Q9H112 138 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 ABCG5Q9H222 651 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 PLGRKTQ9HBL7 147 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 SPACA1Q9HBV2 294 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 TPSG1Q9NRR2 321 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 TSSC4Q9Y5U2 329 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-215ENST00000533946 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
SSBP3-215ENST00000533946 A0A075B6Q4 140 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 FGF16O43320 207 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 LANCL1O43813 399 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 SOX15O60248 233 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 YPEL1O60688 119 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 GLAP06280 429 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 PF4V1P10720 104 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 EGR2P11161 476 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-215ENST00000533946 ARSBP15848 533 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 GNB3P16520 340 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 CD33P20138 364 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 ACTBP60709 375 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 HTD2P86397 168 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 TBCEQ15813 527 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-215ENST00000533946 IGSF11Q5DX21 431 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 ASPHD1Q5U4P2 390 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 FAM131AQ6UXB0 335 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 OR4F17Q8NGA8 305 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 AKR1E2Q96JD6 320 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 YPEL2Q96QA6 119 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 OR5B12Q96R08 314 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 OR4F4Q96R69 305 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 ALX4Q9H161 411 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-215ENST00000533946 OR51E2Q9H255 320 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 FBXL15Q9H469 300 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 GNB4Q9HAV0 340 aa7.53□□□□□ -1.2
SSBP3-215ENST00000533946 CHMP1AQ9HD42 196 aaPredicted RBP7.53□□□□□ -1.2
SSBP3-215ENST00000533946 Q9N2K0 584 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms