RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 DPAGT1Q9H3H5 408 aa6.24□□□□□ -1.41
CASP4-212ENST00000533730 NCOR1P1Q9H4R4 102 aa6.24□□□□□ -1.41
CASP4-212ENST00000533730 METTL8Q9H825 291 aaKnown RBP6.24□□□□□ -1.41
CASP4-212ENST00000533730 PLGRKTQ9HBL7 147 aa6.24□□□□□ -1.41
CASP4-212ENST00000533730 IL36RNQ9UBH0 155 aa6.24□□□□□ -1.41
CASP4-212ENST00000533730 STUB1Q9UNE7 303 aa6.24□□□□□ -1.41
CASP4-212ENST00000533730 SSR3Q9UNL2 185 aa6.24□□□□□ -1.41
CASP4-212ENST00000533730 ST3GAL6Q9Y274 331 aa6.24□□□□□ -1.41
CASP4-212ENST00000533730 LINC00312Q9Y6C7 94 aa6.24□□□□□ -1.41
CASP4-212ENST00000533730 SONP18583 2426 aaKnown RBP6.23□□□□□ -1.41
CASP4-212ENST00000533730 TRGV10A0A0A0MS01 117 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 TRAV40A0A0B4J280 105 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 A0A0G2JK05 382 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 SIRPB1O00241 398 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 SLC17A2O00624 439 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 SLC22A1O15245 554 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 FCGR3BO75015 233 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 CRTAPO75718 401 aaPredicted RBP6.23□□□□□ -1.41
CASP4-212ENST00000533730 OR7C1O76099 320 aaPredicted RBP6.23□□□□□ -1.41
CASP4-212ENST00000533730 GLAP06280 429 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 ZNF728P0DKX0 622 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 CALCBP10092 127 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 MGMTP16455 207 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 PRTN3P24158 256 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 P2RX3P56373 397 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 PAX5Q02548 391 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 RBM39Q14498 530 aaKnown RBP6.23□□□□□ -1.41
CASP4-212ENST00000533730 EDDM3AQ14507 147 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 FAM189A2Q15884 450 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 RAB11BQ15907 218 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 PIGYQ3MUY2 71 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 RBMS3Q6XE24 437 aaKnown RBP6.23□□□□□ -1.41
CASP4-212ENST00000533730 GDPGP1Q6ZNW5 385 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 C9orf139Q6ZV77 190 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 USP43Q70EL4 1123 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 OR2W3Q7Z3T1 314 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 VMO1Q7Z5L0 202 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 TPRA1Q86W33 373 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 FGFRL1Q8N441 504 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 OR4S1Q8NGB4 309 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 OR4D6Q8NGJ1 314 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 RNASE8Q8TDE3 154 aaKnown RBP6.23□□□□□ -1.41
CASP4-212ENST00000533730 C1orf147Q96MC9 270 aaPredicted RBP6.23□□□□□ -1.41
CASP4-212ENST00000533730 TBX15Q96SF7 602 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 BARHL1Q9BZE3 327 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 PPA2Q9H2U2 334 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 GAL3ST2Q9H3Q3 398 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 SRD5A3Q9H8P0 318 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 HEXA-AS1Q9H8Q6 139 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 C19orf12Q9NSK7 152 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 OR6C3Q9NZP0 311 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 V9GY05 133 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 ZNF469Q96JG9 3925 aaPredicted RBP6.23□□□□□ -1.41
CASP4-212ENST00000533730 WNK2Q9Y3S1 2297 aa6.23□□□□□ -1.41
CASP4-212ENST00000533730 NAV3Q8IVL0 2385 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 TRAV24A0A0B4J272 114 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 IGHV1-69DA0A0B4J2H0 117 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 SPINT2O43291 252 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 TCF21O43680 179 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 CA11O75493 328 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 IGHV1-69P01742 117 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 ARSBP15848 533 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 CD36P16671 472 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 RAB3BP20337 219 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 KLF17Q5JT82 389 aaPredicted RBP6.22□□□□□ -1.41
CASP4-212ENST00000533730 C22orf42Q6IC83 251 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 TRAPPC6BQ86SZ2 158 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 FOXRED2Q8IWF2 684 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 OR4M1Q8NGD0 313 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 LHX4Q969G2 390 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 KCTD7Q96MP8 289 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 ZNF714Q96N38 554 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 NKX3-1Q99801 234 aaPredicted RBP6.22□□□□□ -1.41
CASP4-212ENST00000533730 URM1Q9BTM9 101 aaKnown RBP6.22□□□□□ -1.41
CASP4-212ENST00000533730 TMEM59Q9BXS4 323 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 SELENOIQ9C0D9 397 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 CHST6Q9GZX3 395 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 KLK15Q9H2R5 256 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 MAP6D1Q9H9H5 199 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 TXNL4BQ9NX01 149 aaKnown RBP6.22□□□□□ -1.41
CASP4-212ENST00000533730 AK6Q9Y3D8 172 aaKnown RBP6.22□□□□□ -1.41
CASP4-212ENST00000533730 ARHGAP32A7KAX9 2087 aa6.22□□□□□ -1.41
CASP4-212ENST00000533730 VPS13CQ709C8 3753 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 CENPVL3A0A0U1RRI6 287 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 ODAMA1E959 279 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 ZNF729A6NN14 1252 aaPredicted RBP6.21□□□□□ -1.42
CASP4-212ENST00000533730 C17orf98A8MV24 154 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 TMEM14DPA8MWL7 114 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 MCRIP1C9JLW8 97 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 FAM90A26D6RGX4 464 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 GEMIN2O14893 280 aaKnown RBP6.21□□□□□ -1.42
CASP4-212ENST00000533730 CTDSPLO15194 276 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 IGHV4-38-2P0DP08 117 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 FUT3P21217 361 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 UBE2E1P51965 193 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 RPS27AP62979 156 aaKnown RBP6.21□□□□□ -1.42
CASP4-212ENST00000533730 AESQ08117 197 aa6.21□□□□□ -1.42
CASP4-212ENST00000533730 ATXN7L3Q14CW9 347 aaPredicted RBP6.21□□□□□ -1.42
CASP4-212ENST00000533730 TAF9Q16594 264 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms