RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 WNT2BQ93097 391 aa15.14■□□□□ 0.01
PHRF1-205ENST00000533464 DLL3Q9NYJ7 618 aa15.14■□□□□ 0.01
PHRF1-205ENST00000533464 CCL21O00585 134 aa15.14■□□□□ 0.01
PHRF1-205ENST00000533464 RSPO4Q2I0M5 234 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-205ENST00000533464 SLC24A4Q8NFF2 622 aa15.14■□□□□ 0.01
PHRF1-205ENST00000533464 OR10C1Q96KK4 312 aa15.14■□□□□ 0.01
PHRF1-205ENST00000533464 A0A0G2JK05 382 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 H0Y980 276 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 GAMTQ14353 236 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 ASCL5Q7RTU5 278 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 J3QR06 171 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 NPBWR2P48146 333 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 OR2T10Q8NGZ9 312 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 ANKRD36A6QL64 1941 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 MPV17P39210 176 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 IFITM2Q01629 132 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 C19orf57Q0VDD7 668 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 KRTCAP3Q53RY4 240 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 CXorf66Q5JRM2 361 aaPredicted RBP15.13■□□□□ 0.01
PHRF1-205ENST00000533464 TMEM54Q969K7 222 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 PITX3O75364 302 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 ITLN1Q8WWA0 313 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 NOL4LQ96MY1 436 aaPredicted RBP15.13■□□□□ 0.01
PHRF1-205ENST00000533464 TMPRSS5Q9H3S3 457 aa15.13■□□□□ 0.01
PHRF1-205ENST00000533464 NYNRINQ9P2P1 1898 aaKnown RBP15.12■□□□□ 0.01
PHRF1-205ENST00000533464 H3BQ15 152 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 RAB29O14966 203 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 CEBPDP49716 269 aaPredicted RBP15.12■□□□□ 0.01
PHRF1-205ENST00000533464 PKIBQ9C010 78 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 GAPDHP04406 335 aaKnown RBP15.12■□□□□ 0.01
PHRF1-205ENST00000533464 PDPNQ86YL7 162 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 LRRC75AQ8NAA5 344 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 ARHGEF17Q96PE2 2063 aaPredicted RBP15.12■□□□□ 0.01
PHRF1-205ENST00000533464 DOCK6Q96HP0 2047 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 C1QL1O75973 258 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 APELAP0DMC3 54 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 OR1L8Q8NGR8 309 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 RNF2Q99496 336 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 F12P00748 615 aaPredicted RBP15.12■□□□□ 0.01
PHRF1-205ENST00000533464 COX5BP10606 129 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 OVCH2Q7RTZ1 564 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 NFAM1Q8NET5 270 aaPredicted RBP15.12■□□□□ 0.01
PHRF1-205ENST00000533464 OR8G5Q8NG78 346 aa15.12■□□□□ 0.01
PHRF1-205ENST00000533464 CTXND1A0A1B0GTU2 59 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 LOC102723971A0A1B0GUV8 181 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 HPRT1P00492 218 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 CD74P04233 296 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 ZNF658BQ4V348 819 aaPredicted RBP15.11■□□□□ 0.01
PHRF1-205ENST00000533464 HEXA-AS1Q9H8Q6 139 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 GPR179Q6PRD1 2367 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 CAMPP49913 170 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 SULT1A2P50226 295 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 TEPPQ6URK8 271 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 OR10G8Q8NGN5 311 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 OR1L1Q8NH94 360 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 MARS2Q96GW9 593 aaKnown RBP15.11■□□□□ 0.01
PHRF1-205ENST00000533464 ERVH48-1M5A8F1 160 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 NSUN5P2Q63ZY6 315 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 KLF14Q8TD94 323 aaPredicted RBP15.11■□□□□ 0.01
PHRF1-205ENST00000533464 TIMP4Q99727 224 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 PGLYRP1O75594 196 aaPredicted RBP15.11■□□□□ 0.01
PHRF1-205ENST00000533464 RPS11P62280 158 aaKnown RBP eCLIP15.11■□□□□ 0.01
PHRF1-205ENST00000533464 SIGLEC12Q96PQ1 595 aa15.11■□□□□ 0.01
PHRF1-205ENST00000533464 HOXD4P09016 255 aaPredicted RBP15.1■□□□□ 0.01
PHRF1-205ENST00000533464 BRS3P32247 399 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 SUCLG1P53597 346 aaKnown RBP15.1■□□□□ 0.01
PHRF1-205ENST00000533464 RPEL1Q2QD12 228 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 ZNF362Q5T0B9 420 aaPredicted RBP15.1■□□□□ 0.01
PHRF1-205ENST00000533464 FA2HQ7L5A8 372 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 NUDT16L1Q9BRJ7 211 aaKnown RBP15.1■□□□□ 0.01
PHRF1-205ENST00000533464 CELA3AP09093 270 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 HOXB1P14653 301 aaPredicted RBP15.1■□□□□ 0.01
PHRF1-205ENST00000533464 TOMM20LQ6UXN7 152 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 MRPL30Q8TCC3 161 aaKnown RBP15.1■□□□□ 0.01
PHRF1-205ENST00000533464 FAM122AQ96E09 287 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 C1QL2Q7Z5L3 287 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 NRIP2Q9BQI9 281 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 K7N7A8 449 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 GNG7O60262 68 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 ZIC3O60481 467 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 FAM157CP0CG43 387 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 ACP1P24666 158 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 FCER1GP30273 86 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 ZNF880Q6PDB4 577 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 SSX7Q7RTT5 188 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 RSG1Q9BU20 258 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 CACNA1DQ01668 2161 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 LOC390937A0A1W2PQ73 354 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 MUC1P15941 1255 aaPredicted RBP15.1■□□□□ 0.01
PHRF1-205ENST00000533464 TCL1AP56279 114 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 UNC119Q13432 240 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 OR4X1Q8NH49 305 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 UBTD1Q9HAC8 227 aa15.1■□□□□ 0.01
PHRF1-205ENST00000533464 AKAP6Q13023 2319 aa15.09■□□□□ 0.01
PHRF1-205ENST00000533464 AP4M1O00189 453 aa15.09■□□□□ 0.01
PHRF1-205ENST00000533464 RHOVQ96L33 236 aa15.09■□□□□ 0.01
PHRF1-205ENST00000533464 B4DEV8 164 aa15.09■□□□□ 0.01
PHRF1-205ENST00000533464 RNASEKQ6P5S7 137 aaKnown RBP15.09■□□□□ 0.01
PHRF1-205ENST00000533464 MED12Q93074 2177 aa15.09■□□□□ 0.01
PHRF1-205ENST00000533464 CD1BP29016 333 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms