RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 PLK3Q9H4B4 646 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 PSENENQ9NZ42 101 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 CHD3Q12873 2000 aaKnown RBP12.59□□□□□ -0.39
CAPN1-224ENST00000533129 TYMSP04818 313 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 COX6A1P12074 109 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 FGF12P61328 243 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 PSG4Q00888 419 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 HAPLN4Q86UW8 402 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 BATF2Q8N1L9 274 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 LHX4Q969G2 390 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 ANAPC16Q96DE5 110 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 VPS13AQ96RL7 3174 aa12.59□□□□□ -0.39
CAPN1-224ENST00000533129 GGCTO75223 188 aaKnown RBP12.58□□□□□ -0.39
CAPN1-224ENST00000533129 BCL3P20749 454 aa12.58□□□□□ -0.39
CAPN1-224ENST00000533129 C6orf15Q6UXA7 325 aaPredicted RBP12.58□□□□□ -0.39
CAPN1-224ENST00000533129 SAXO1Q8IYX7 474 aa12.58□□□□□ -0.39
CAPN1-224ENST00000533129 SPSB4Q96A44 273 aa12.58□□□□□ -0.39
CAPN1-224ENST00000533129 IMMP1LQ96LU5 166 aa12.58□□□□□ -0.39
CAPN1-224ENST00000533129 PCGF1Q9BSM1 259 aa12.58□□□□□ -0.39
CAPN1-224ENST00000533129 SNHG12Q9BXW3 62 aa12.58□□□□□ -0.39
CAPN1-224ENST00000533129 OR51I2Q9H344 312 aa12.58□□□□□ -0.39
CAPN1-224ENST00000533129 DCAF16Q9NXF7 216 aa12.58□□□□□ -0.39
CAPN1-224ENST00000533129 DSCR4P56555 118 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-224ENST00000533129 CISD2Q8N5K1 135 aaKnown RBP12.58□□□□□ -0.4
CAPN1-224ENST00000533129 OR2H1Q9GZK4 316 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 WNT5BQ9H1J7 359 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 SLC39A9Q9NUM3 307 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 TIMM9Q9Y5J7 89 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 LRRC3CA6NJW4 275 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 OR4A8P0C604 315 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 PSG2P11465 335 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 LIFP15018 202 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 B4GALT1P15291 398 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 SRP14P37108 136 aaKnown RBP12.58□□□□□ -0.4
CAPN1-224ENST00000533129 PCSK4Q6UW60 755 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 Q6ZRM9 215 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 MRPL41Q8IXM3 137 aaKnown RBP12.58□□□□□ -0.4
CAPN1-224ENST00000533129 RIMS4Q9H426 269 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-224ENST00000533129 OR6C3Q9NZP0 311 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 CACNG5Q9UF02 275 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 FUT9Q9Y231 359 aa12.58□□□□□ -0.4
CAPN1-224ENST00000533129 A0A0J9YW62 118 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 A0A1W2PPQ1 181 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 M0R143 59 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 TNFSF11O14788 317 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 DNPH1O43598 174 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 ZIC3O60481 467 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 PATE4P0C8F1 98 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 IAPPP10997 89 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 PSMB3P49720 205 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 ERVFC1-1P60608 527 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 OR2T10Q8NGZ9 312 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 TAF15Q92804 592 aaKnown RBP eCLIP12.57□□□□□ -0.4
CAPN1-224ENST00000533129 RPUSD4Q96CM3 377 aaKnown RBP12.57□□□□□ -0.4
CAPN1-224ENST00000533129 ELOVL1Q9BW60 279 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 SRXN1Q9BYN0 137 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 OR2W1Q9Y3N9 320 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 LRP5LA4QPB2 252 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 MT-CO3P00414 261 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 EDN3P14138 238 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 ELLP55199 621 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-224ENST00000533129 CASP6P55212 293 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 PCBD1P61457 104 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 ZNF324BQ6AW86 544 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-224ENST00000533129 OR51H1Q8NH63 302 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 MRPL30Q8TCC3 161 aaKnown RBP12.57□□□□□ -0.4
CAPN1-224ENST00000533129 TMEM37Q8WXS4 190 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 PARLQ9H300 379 aa12.57□□□□□ -0.4
CAPN1-224ENST00000533129 CD300LBA8K4G0 201 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 RAC1P63000 192 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 GBGT1Q8N5D6 347 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 RPP25LQ8N5L8 163 aaKnown RBP12.56□□□□□ -0.4
CAPN1-224ENST00000533129 NEK7Q8TDX7 302 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 OR4C12Q96R67 309 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
CAPN1-224ENST00000533129 DMDP11532 3685 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 SPEGQ15772 3267 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 KIR2DL5BA0A0G2JN68 375 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 KIR2DL5BA0A0G2JPC4 375 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 COX5BP10606 129 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 RAB4AP20338 218 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 PRDX4Q13162 271 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 IZUMO4Q1ZYL8 232 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 C1orf194Q5T5A4 169 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 KIR2DL5AQ8N109 375 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 RBM14Q96PK6 669 aaKnown RBP12.56□□□□□ -0.4
CAPN1-224ENST00000533129 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 MANBALQ9NQG1 85 aa12.56□□□□□ -0.4
CAPN1-224ENST00000533129 KIAA2026Q5HYC2 2103 aa12.55□□□□□ -0.4
CAPN1-224ENST00000533129 TRBV6-6A0A0A6YYG2 114 aa12.55□□□□□ -0.4
CAPN1-224ENST00000533129 GJE1A6NN92 205 aa12.55□□□□□ -0.4
CAPN1-224ENST00000533129 VENTXO95231 258 aa12.55□□□□□ -0.4
CAPN1-224ENST00000533129 IGKV1-39P01597 117 aa12.55□□□□□ -0.4
CAPN1-224ENST00000533129 IGKV1D-39P04432 117 aa12.55□□□□□ -0.4
CAPN1-224ENST00000533129 TMEM164Q5U3C3 297 aa12.55□□□□□ -0.4
CAPN1-224ENST00000533129 TEX38Q6PEX7 206 aa12.55□□□□□ -0.4
CAPN1-224ENST00000533129 FAM180AQ6UWF9 173 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms