RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 IGKV1-39P01597 117 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 IGKV1D-39P04432 117 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 FHITP49789 147 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 EDDM3BP56851 147 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 NKX6-1P78426 367 aaPredicted RBP11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 SRPXP78539 464 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 HMGN3Q15651 99 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 NMSQ5H8A3 153 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 GPR146Q96CH1 333 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 ABHD14BQ96IU4 210 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 MED9Q9NWA0 146 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 SHOXO15266 292 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 CHST1O43916 411 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 RAMP3O60896 148 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 C1QL1O75973 258 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 LMO1P25800 156 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 CD80P33681 288 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 MEGF10Q96KG7 1140 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 PLEKHA2Q9HB19 425 aa11.22□□□□□ -0.61
CAPRIN1-212ENST00000532820 CYB5R3P00387 301 aaPredicted RBP11.21□□□□□ -0.61
CAPRIN1-212ENST00000532820 ZP3P21754 424 aa11.21□□□□□ -0.61
CAPRIN1-212ENST00000532820 LPAR6P43657 344 aa11.21□□□□□ -0.61
CAPRIN1-212ENST00000532820 HSD17B13Q7Z5P4 300 aaPredicted RBP11.21□□□□□ -0.61
CAPRIN1-212ENST00000532820 IGSF23A1L1A6 192 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 C16orf97H3BN30 126 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 WRBO00258 174 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 CCL8P80075 99 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 ADAM5Q6NVV9 412 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 OR2C3Q8N628 320 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 NINJ1Q92982 152 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 FAM96BQ9Y3D0 163 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 C1QTNF9BB2RNN3 333 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 ST8SIA5O15466 376 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 GPR137BO60478 399 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 VAMP2P63027 116 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 DEFA5Q01523 94 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 EWSR1Q01844 656 aaKnown RBP eCLIP11.21□□□□□ -0.621e-6■■□□□ 12.4
CAPRIN1-212ENST00000532820 ZNF816Q0VGE8 651 aaPredicted RBP11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 EIF2S3LQ2VIR3 472 aaKnown RBP11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 SHEQ5VZ18 495 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 FAM169BQ8N8A8 192 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 MARC2Q969Z3 335 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 C5orf30Q96GV9 206 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 CACNG5Q9UF02 275 aa11.21□□□□□ -0.62
CAPRIN1-212ENST00000532820 OOEPA6NGQ2 149 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 TAAR5O14804 337 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 FGF16O43320 207 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 BTN1A1Q13410 526 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 ZNF585BQ52M93 769 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 SLC35E4Q6ICL7 350 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 LPAR3Q9UBY5 353 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 ABCA4P78363 2273 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 JTBO76095 146 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 TUBG1P23258 451 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 RPL30P62888 115 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 UTF1Q5T230 341 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 ATRAIDQ6UW56 229 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 LEAP2Q969E1 77 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 SPIN2AQ99865 258 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 SPIN2BQ9BPZ2 258 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 FAM234AQ9H0X4 552 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 TUBG2Q9NRH3 451 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 DOCK11Q5JSL3 2073 aa11.2□□□□□ -0.62
CAPRIN1-212ENST00000532820 SRRM5B3KS81 715 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 KRASP01116 189 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 IGKV1-5P01602 117 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 IAPPP10997 89 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 P2RY1P47900 373 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 BSPH1Q075Z2 132 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 MARVELD3Q96A59 401 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 SSUH2Q9Y2M2 353 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 TACC2O95359 2948 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 DSCAMO60469 2012 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 DPRXA6NFQ7 191 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 ACAA1P09110 424 aaPredicted RBP11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 TNFAIP6P98066 277 aaPredicted RBP11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 MST1LQ2TV78 715 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 FGFRL1Q8N441 504 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 TRGV8A0A0C4DH27 118 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 NPIPB11E5RHQ5 1161 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 ZNF737O75373 536 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 IGHV1-46P01743 117 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 CD200P41217 278 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 SELENOVP59797 346 aa11.19□□□□□ -0.62
CAPRIN1-212ENST00000532820 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 PVALBP20472 110 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 MRGPRGQ86SM5 289 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 OR5C1Q8NGR4 320 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 PLEKHF2Q9H8W4 249 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 GCM1Q9NP62 436 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 MSRB2Q9Y3D2 182 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 A0A1W2PPE3 182 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 THBDP07204 575 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 G6PCP35575 357 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 ZNF616Q08AN1 781 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 TMEM267Q0VDI3 215 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 TMEM108Q6UXF1 575 aa11.18□□□□□ -0.62
CAPRIN1-212ENST00000532820 Q6ZRG5 221 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms