RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 EFNA3P52797 238 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 CLRN1P58418 232 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 DUSP2Q05923 314 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 PRSS53Q2L4Q9 553 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 PDLIM3Q53GG5 364 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 SPANXN5Q5MJ07 72 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 FBXW9Q5XUX1 488 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 CFAP161Q6P656 301 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 Q8NFD4 153 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 C16orf52Q8NHV5 167 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 PRSS27Q9BQR3 290 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 WDR61Q9GZS3 305 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 FBXO34Q9NWN3 711 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 COA3Q9Y2R0 106 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 RAXQ9Y2V3 346 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 LRP12Q9Y561 859 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 DPRXA6NFQ7 191 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 C17orf51A8MQB3 221 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 K7N7A8 449 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 UPK3AO75631 287 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 DGAT2L6Q6ZPD8 337 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 CYP2G1PQ6ZSU1 146 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 CDC20BQ86Y33 519 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 BHLHE23Q8NDY6 225 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 OR10W1Q8NGF6 305 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 RCC1LQ96I51 464 aaKnown RBP5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 SGCZQ96LD1 299 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 IMMP2LQ96T52 175 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 CSTL1Q9H114 145 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 DEFB127Q9H1M4 99 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 FLRT3Q9NZU0 649 aa5.9□□□□□ -1.46
TGFBR3-209ENST00000532540 A0A0A6YYD5 115 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 SOCS1O15524 211 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 ZFAND5O76080 213 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 KBTBD11O94819 623 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 CDS2O95674 445 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 IL6RP08887 468 aaPredicted RBP5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 VSIG8P0DPA2 414 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 MAS1LP35410 378 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 IER3P46695 156 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 CCL20P78556 96 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 COX19Q49B96 90 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 C1orf140Q5VVS0 124 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 ATOH7Q8N100 152 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM251Q8N6I4 163 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM252Q8N6L7 170 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 OR13G1Q8NGZ3 307 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM186Q96B77 213 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 BORCS8Q96FH0 119 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 BOD1Q96IK1 185 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM191AQ9H0A3 160 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 SLC25A22Q9H936 323 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF407Q9C0G0 2248 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 HEATR5BQ9P2D3 2071 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 DSPP15924 2871 aaKnown RBP5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 M0R2Z0 102 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 CCL25O15444 150 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 SYNGR4O95473 234 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 MDH2P40926 338 aaKnown RBP5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 DAP3P51398 398 aaKnown RBP5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 RBX1P62877 108 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 MRPL49Q13405 166 aaKnown RBP5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 PLAC9Q5JTB6 97 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 FFAR4Q5NUL3 377 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 TSPO2Q5TGU0 170 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 C9orf135Q5VTT2 229 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 SPINK14Q6IE38 97 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 OR51E1Q8TCB6 317 aa5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 SCARF2Q96GP6 870 aaPredicted RBP5.9□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF292O60281 2723 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 KIR2DL5BA0A0G2JN68 375 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 KIR2DL5BA0A0G2JPC4 375 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 FBLL1A6NHQ2 334 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 LRRC3CA6NJW4 275 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 SPINK4O60575 86 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 RHBDL1O75783 438 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 NUDT3O95989 172 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 IAPPP10997 89 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 GDF1P27539 372 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 SLC6A8P48029 635 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 RND2P52198 227 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 RPL27P61353 136 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 SMAGPQ0VAQ4 97 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF684Q5T5D7 378 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 RNASEKQ6P5S7 137 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 YRDCQ86U90 279 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 KIR2DL5AQ8N109 375 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 CLDND2Q8NHS1 167 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 WDYHV1Q96HA8 205 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 SIGMAR1Q99720 223 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 PSENENQ9NZ42 101 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 KLHDC2Q9Y2U9 406 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 ADAM20O43506 726 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 PSG1P11464 419 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 PTGER4P35408 488 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 FAM53BQ14153 422 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 TIGITQ495A1 244 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 CARD17Q5XLA6 110 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 RHBDD2Q6NTF9 364 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms