RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	CMSS1	Q9BQ75	279 aa	Known RBP	13.89	□□□□□ -0.19
CTSB-223	ENST00000532370	PARP12	Q9H0J9	701 aa	Known RBP	13.89	□□□□□ -0.19
CTSB-223	ENST00000532370	RIMS4	Q9H426	269 aa	Predicted RBP	13.89	□□□□□ -0.19
CTSB-223	ENST00000532370		Q9N2K0	584 aa		13.89	□□□□□ -0.19
CTSB-223	ENST00000532370	C12orf4	Q9NQ89	552 aa		13.89	□□□□□ -0.19
CTSB-223	ENST00000532370	ABRACL	Q9P1F3	81 aa		13.89	□□□□□ -0.19
CTSB-223	ENST00000532370		A0A075B6Q4	140 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	SNRPB	P14678	240 aa	Known RBP	13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	TMEM11	P17152	192 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	IL3RA	P26951	378 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	TGFBR1	P36897	503 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	STEAP3	Q658P3	488 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	SFXN4	Q6P4A7	337 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	MOB1B	Q7L9L4	216 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	AKR1E2	Q96JD6	320 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	ABHD14A	Q9BUJ0	271 aa		13.88	□□□□□ -0.19
CTSB-223	ENST00000532370	YPEL1	O60688	119 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	LPL	P06858	475 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	SCT	P09683	121 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	ZNF137P	P52743	207 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	HERPUD1	Q15011	391 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	C11orf88	Q6PI97	169 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	ODF3L1	Q8IXM7	274 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	YIPF6	Q96EC8	236 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	YPEL2	Q96QA6	119 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	ATG5	Q9H1Y0	275 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	VCX3A	Q9NNX9	186 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	OR1A1	Q9P1Q5	309 aa		13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	ELF5	Q9UKW6	265 aa	Predicted RBP	13.87	□□□□□ -0.19
CTSB-223	ENST00000532370	IGKV1-6	A0A0C4DH72	117 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	MFNG	O00587	321 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	ST8SIA5	O15466	376 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	HIST1H1D	P16402	221 aa	Known RBP	13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	VDAC2	P45880	294 aa	Predicted RBP	13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	OR3A3	P47888	321 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	HLA-DRB3	P79483	266 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	TGIF2LX	Q8IUE1	241 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	DTX3	Q8N9I9	347 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	LGALS14	Q8TCE9	139 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	WIPF2	Q8TF74	440 aa	Predicted RBP	13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	MAFIP	Q8WZ33	124 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	PTX4	Q96A99	478 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	EAF1	Q96JC9	268 aa	Predicted RBP	13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	WNT10A	Q9GZT5	417 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	SLC23A1	Q9UHI7	598 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	MOB4	Q9Y3A3	225 aa		13.86	□□□□□ -0.19
CTSB-223	ENST00000532370	METTL21EP	A6NDL7	271 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	RGS11	O94810	467 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	CD3G	P09693	182 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	CD28	P10747	220 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	LSM3	P62310	102 aa	Known RBP	13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	EBI3	Q14213	229 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	C9orf152	Q5JTZ5	239 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	LY6G6F	Q5SQ64	297 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	IZUMO1	Q8IYV9	350 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	OR2AK2	Q8NG84	335 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	IFI27L2	Q9H2X8	130 aa		13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.85	□□□□□ -0.19
CTSB-223	ENST00000532370	TRDC	B7Z8K6	153 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	LANCL1	O43813	399 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	AIRE	O43918	545 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	FCGR3A	P08637	254 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	CD1B	P29016	333 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	CEACAM6	P40199	344 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	IDNK	Q5T6J7	187 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	TREML4	Q6UXN2	200 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370		Q8N6K4	173 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	C5orf56	Q8N8D9	126 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	OR5H6	Q8NGV6	325 aa		13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	MRPL20	Q9BYC9	149 aa	Known RBP	13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	MRPS26	Q9BYN8	205 aa	Known RBP	13.84	□□□□□ -0.19
CTSB-223	ENST00000532370	SAA2-SAA4	A0A096LPE2	208 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370		M0QZ24	198 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370		M0QZK8	103 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	PEX14	O75381	377 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	TSPAN15	O95858	294 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	SAA2	P0DJI9	122 aa	Predicted RBP	13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	MRPS15	P82914	257 aa	Known RBP	13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	CDNF	Q49AH0	187 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	OR2T10	Q8NGZ9	312 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	PLSCR3	Q9NRY6	295 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	MGAT4A	Q9UM21	535 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	WNK1	Q9H4A3	2382 aa		13.83	□□□□□ -0.2
CTSB-223	ENST00000532370	NCBP2L	A6PVI3	153 aa	Known RBP	13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	SERPINE3	A8MV23	424 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	FABP7	O15540	132 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	HSPA12A	O43301	675 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	TXNL1	O43396	289 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	MOS	P00540	346 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	GSTT2	P0CG29	244 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	GSTT2B	P0CG30	244 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	ZBTB25	P24278	435 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	F2RL1	P55085	397 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	LSAMP	Q13449	338 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	TIMM50	Q3ZCQ8	353 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	RPL39P5	Q59GN2	51 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	IGSF11	Q5DX21	431 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	C10orf99	Q6UWK7	81 aa		13.82	□□□□□ -0.2

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