RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TMEM54Q969K7 222 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 MRPL24Q96A35 216 aaKnown RBP9.73□□□□□ -0.85
PTPRK-221ENST00000532331 MRGPRFQ96AM1 343 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 NAT8BQ9UHF3 227 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 J3QW42 95 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 HTR1DP28221 377 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 DYRK2Q92630 601 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 PGLYRP3Q96LB9 341 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 PRDM14Q9GZV8 571 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 RALYQ9UKM9 306 aaKnown RBP9.73□□□□□ -0.85
PTPRK-221ENST00000532331 IGF2P01344 180 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 G6PCP35575 357 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 HOXA4Q00056 320 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-221ENST00000532331 WNT5BQ9H1J7 359 aa9.73□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF716A6NP11 495 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 FSTP19883 344 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 LOXL3P58215 753 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF154Q13106 437 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 RPEL1Q2QD12 228 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 PCSK4Q6UW60 755 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 FAM219AQ8IW50 185 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 OR1L1Q8NH94 360 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 MED19A0JLT2 244 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-221ENST00000532331 CECR9P0C854 216 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 MC5RP33032 325 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 CDKN1AP38936 164 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 EFNB2P52799 333 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 MOGAT2Q3SYC2 334 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 IGKV3-7A0A075B6H7 116 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 SCO1O75880 301 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 PPP1CCP36873 323 aaKnown RBP9.72□□□□□ -0.85
PTPRK-221ENST00000532331 ZXDCQ2QGD7 858 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF66Q6ZN08 573 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 KLHDC1Q8N7A1 406 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 FADS6Q8N9I5 356 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 P2RX4Q99571 388 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 NXF2Q9GZY0 626 aaKnown RBP9.72□□□□□ -0.85
PTPRK-221ENST00000532331 TGFBR3LH3BV60 316 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 HPXP02790 462 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 GAMTQ14353 236 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 CENPVQ7Z7K6 275 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-221ENST00000532331 CLRN3Q8NCR9 226 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 JMJD8Q96S16 334 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 GHITMQ9H3K2 345 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 ASCL3Q9NQ33 180 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 RABAC1Q9UI14 185 aa9.72□□□□□ -0.85
PTPRK-221ENST00000532331 DUXBA0A1W2PPF3 345 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 RGS13O14921 159 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 SNCGO76070 127 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 AMTP48728 403 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 SULT1A1P50225 295 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 SPCS3P61009 180 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 FGF12P61328 243 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 SEZ6L2Q6UXD5 910 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 PKIBQ9C010 78 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 TMEM106BQ9NUM4 274 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 RBFOX3A6NFN3 312 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 OR2H2O95918 312 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 APELAP0DMC3 54 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 LYZL2Q7Z4W2 148 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 NUP37Q8NFH4 326 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 FAM222BQ8WU58 562 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 DSPPQ9NZW4 1301 aa9.71□□□□□ -0.85
PTPRK-221ENST00000532331 C17orf51A8MQB3 221 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 PSG2P11465 335 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 LCN2P80188 198 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 CLEC9AQ6UXN8 241 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 C11orf42Q8N5U0 333 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 ADAD2Q8NCV1 583 aaKnown RBP9.71□□□□□ -0.86
PTPRK-221ENST00000532331 CNOT1A5YKK6 2376 aaKnown RBP9.71□□□□□ -0.86
PTPRK-221ENST00000532331 IGLV1-36A0A0B4J1U3 117 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 GUCA2BQ16661 112 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 FAM78BQ5VT40 261 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 C19orf35Q6ZS72 473 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 C17orf82Q86X59 251 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-221ENST00000532331 HDHD3Q9BSH5 251 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-221ENST00000532331 CBLN4Q9NTU7 201 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 FCGR3AP08637 254 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 PMCHP20382 165 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 ROM1Q03395 351 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 RNF212Q495C1 297 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 TMEM37Q8WXS4 190 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 SSBP3Q9BWW4 388 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-221ENST00000532331 LHFPL6Q9Y693 200 aa9.71□□□□□ -0.86
PTPRK-221ENST00000532331 SIRT4Q9Y6E7 314 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-221ENST00000532331 NINQ8N4C6 2090 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 ZSWIM8A7E2V4 1837 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 SPINK4O60575 86 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 NPY1RP25929 384 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 TMEM50BP56557 158 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 PSG5Q15238 335 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 C10orf128Q5T292 105 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 IGHV3-72A0A0B4J1Y9 119 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 NEURL1O76050 574 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 MMP7P09237 267 aaPredicted RBP9.7□□□□□ -0.86
PTPRK-221ENST00000532331 IGHV1-2P23083 117 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 LHX2P50458 406 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 PTTG1IPP53801 180 aa9.7□□□□□ -0.86
PTPRK-221ENST00000532331 EWSR1Q01844 656 aaKnown RBP eCLIP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms