RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 LINC01619G3V211 115 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 SPINT2O43291 252 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 ZNF780AO75290 641 aaPredicted RBP6.87□□□□□ -1.31
USF1-210ENST00000531842 BRI3O95415 125 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 IGLV1-40P01703 118 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 IGF1P05019 195 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 GTF2F2P13984 249 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 BDKRB2P30411 391 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 ZNF134P52741 427 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 RBM11P57052 281 aaKnown RBP6.87□□□□□ -1.31
USF1-210ENST00000531842 RUNX1Q01196 453 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 DEFA5Q01523 94 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 PAX5Q02548 391 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 IRF3Q14653 427 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 SLC22A6Q4U2R8 563 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 TMPRSS11AQ6ZMR5 421 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 C8orf59Q8N0T1 100 aaPredicted RBP6.87□□□□□ -1.31
USF1-210ENST00000531842 NANOGP1Q8N7R0 232 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 BPIFB6Q8NFQ5 453 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 OR6Q1Q8NGQ2 317 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 TMEM106AQ96A25 262 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 SMIM19Q96E16 107 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 MS4A10Q96PG2 267 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 NABP2Q9BQ15 211 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 SPATA25Q9BR10 227 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 TOLLIPQ9H0E2 274 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 RAB9BQ9NP90 201 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 GFOD1Q9NXC2 390 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 CNOT2Q9NZN8 540 aaKnown RBP6.87□□□□□ -1.31
USF1-210ENST00000531842 CKLFQ9UBR5 152 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 ADAM30Q9UKF2 790 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 TRAPPC2LQ9UL33 140 aa6.87□□□□□ -1.31
USF1-210ENST00000531842 LSM2Q9Y333 95 aaKnown RBP6.87□□□□□ -1.31
USF1-210ENST00000531842 EXOSC1Q9Y3B2 195 aaKnown RBP6.87□□□□□ -1.31
USF1-210ENST00000531842 IGHV7-81A0A0B4J1V7 117 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 TRAV41A0A0B4J266 112 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 A0A1W2PN81 502 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 IZUMO1RA6ND01 250 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 MCRIP1C9JLW8 97 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 C15orf65H3BRN8 121 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 AIPO00170 330 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 ORC5O43913 435 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 GPX5O75715 221 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 LY6G6CO95867 125 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 MT-ND4P03905 459 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 CD1BP29016 333 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 CHRNA7P36544 502 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 RIPK1Q13546 671 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 MMDQ15546 238 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 MPV17LQ2QL34 196 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 NHLRC3Q5JS37 347 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 C6orf141Q5SZD1 244 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 AHSA2Q719I0 299 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 LINC00596Q86U02 117 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 RPP25LQ8N5L8 163 aaKnown RBP6.86□□□□□ -1.31
USF1-210ENST00000531842 LINC00311Q8N616 119 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 SETD9Q8NE22 299 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 OR8H1Q8NGG4 311 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 OR52M1Q8NGK5 317 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 TMED9Q9BVK6 235 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 ANKRD60Q9BZ19 345 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 WFDC10AQ9H1F0 79 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 OR51J1Q9H342 316 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 IFT22Q9H7X7 185 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 SPACA1Q9HBV2 294 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 CHCHD3Q9NX63 227 aaKnown RBP6.86□□□□□ -1.31
USF1-210ENST00000531842 ETAA1Q9NY74 926 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 IL36GQ9NZH8 169 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 SELENOKQ9Y6D0 94 aa6.86□□□□□ -1.31
USF1-210ENST00000531842 PNMA8CA0A1B0GUJ8 204 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 A0A1W2PP11 408 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 A0A1W2PPK0 400 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 FAM90A10PA6NDY2 464 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 EFCAB10A6NFE3 127 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 C12orf77C9JDV5 145 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 TXNL1O43396 289 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 IGLV1-51P01701 117 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 CDK1P06493 297 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 LGALS1P09382 135 aaKnown RBP6.85□□□□□ -1.31
USF1-210ENST00000531842 OR5H8P0DN80 308 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 MYL12AP19105 171 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 FSTP19883 344 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 PITPNAQ00169 270 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 GPR176Q14439 515 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 CT45A1Q5HYN5 189 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 C6orf183Q5T699 404 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 SYT6Q5T7P8 510 aaPredicted RBP6.85□□□□□ -1.31
USF1-210ENST00000531842 RNLSQ5VYX0 342 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 RAB12Q6IQ22 244 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 ZNF497Q6ZNH5 498 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 SGPP2Q8IWX5 399 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 JAGN1Q8N5M9 183 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 C8orf31Q8N9H6 132 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 ZNF439Q8NDP4 499 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 OR4K15Q8NH41 348 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 CT45A3Q8NHU0 189 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 DERL3Q96Q80 235 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 OR14A2Q96R54 314 aa6.85□□□□□ -1.31
USF1-210ENST00000531842 OR4C12Q96R67 309 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms