RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 LINC00315P59091 139 aa2.55□□□□□ -2
USP47-211ENST00000531513 REEP5Q00765 189 aa2.55□□□□□ -2
USP47-211ENST00000531513 MOBPQ13875 183 aa2.55□□□□□ -2
USP47-211ENST00000531513 TMEM69Q5SWH9 247 aa2.55□□□□□ -2
USP47-211ENST00000531513 KPRPQ5T749 579 aaPredicted RBP2.55□□□□□ -2
USP47-211ENST00000531513 RASSF6Q6ZTQ3 369 aa2.55□□□□□ -2
USP47-211ENST00000531513 EVC2Q86UK5 1308 aa2.55□□□□□ -2
USP47-211ENST00000531513 NAA40Q86UY6 237 aa2.55□□□□□ -2
USP47-211ENST00000531513 SGPP2Q8IWX5 399 aa2.55□□□□□ -2
USP47-211ENST00000531513 OR1M1Q8NGA1 313 aa2.55□□□□□ -2
USP47-211ENST00000531513 OTUB2Q96DC9 234 aa2.55□□□□□ -2
USP47-211ENST00000531513 CCDC42Q96M95 316 aa2.55□□□□□ -2
USP47-211ENST00000531513 TRIB3Q96RU7 358 aa2.55□□□□□ -2
USP47-211ENST00000531513 GNB1LQ9BYB4 327 aa2.55□□□□□ -2
USP47-211ENST00000531513 BCL2L14Q9BZR8 327 aa2.55□□□□□ -2
USP47-211ENST00000531513 EIF5A2Q9GZV4 153 aaKnown RBP2.55□□□□□ -2
USP47-211ENST00000531513 GABARAPL1Q9H0R8 117 aa2.55□□□□□ -2
USP47-211ENST00000531513 OR2D2Q9H210 308 aa2.55□□□□□ -2
USP47-211ENST00000531513 OR51V1Q9H2C8 321 aa2.55□□□□□ -2
USP47-211ENST00000531513 DKKL1Q9UK85 242 aa2.55□□□□□ -2
USP47-211ENST00000531513 POLR1DQ9Y2S0 133 aa2.55□□□□□ -2
USP47-211ENST00000531513 HDGFL3Q9Y3E1 203 aa2.55□□□□□ -2
USP47-211ENST00000531513 ICOSQ9Y6W8 199 aa2.55□□□□□ -2
USP47-211ENST00000531513 IGKV1OR2-108A0A075B7D4 117 aa2.54□□□□□ -2
USP47-211ENST00000531513 IGHV3OR15-7A0A075B7D8 119 aa2.54□□□□□ -2
USP47-211ENST00000531513 D6RAR5 112 aa2.54□□□□□ -2
USP47-211ENST00000531513 K7EM74 188 aa2.54□□□□□ -2
USP47-211ENST00000531513 IGHG2P01859 326 aa2.54□□□□□ -2
USP47-211ENST00000531513 OR4A8P0C604 315 aa2.54□□□□□ -2
USP47-211ENST00000531513 ZNF286BP0CG31 522 aa2.54□□□□□ -2
USP47-211ENST00000531513 SLCO1A2P46721 670 aa2.54□□□□□ -2
USP47-211ENST00000531513 GDI2P50395 445 aaKnown RBP2.54□□□□□ -2
USP47-211ENST00000531513 AP3S2P59780 193 aa2.54□□□□□ -2
USP47-211ENST00000531513 TMEM267Q0VDI3 215 aaPredicted RBP2.54□□□□□ -2
USP47-211ENST00000531513 C1orf195Q5TG92 126 aa2.54□□□□□ -2
USP47-211ENST00000531513 SYPL2Q5VXT5 272 aa2.54□□□□□ -2
USP47-211ENST00000531513 IGFL3Q6UXB1 125 aa2.54□□□□□ -2
USP47-211ENST00000531513 ATP5L2Q7Z4Y8 100 aa2.54□□□□□ -2
USP47-211ENST00000531513 LRRC34Q8IZ02 419 aa2.54□□□□□ -2
USP47-211ENST00000531513 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
USP47-211ENST00000531513 OR1P1Q8NH06 330 aa2.54□□□□□ -2
USP47-211ENST00000531513 C16orf78Q8WTQ4 265 aa2.54□□□□□ -2
USP47-211ENST00000531513 EBNA1BP2Q99848 306 aaKnown RBP2.54□□□□□ -2
USP47-211ENST00000531513 SEC22CQ9BRL7 303 aa2.54□□□□□ -2
USP47-211ENST00000531513 MED18Q9BUE0 208 aa2.54□□□□□ -2
USP47-211ENST00000531513 ZNF230Q9UIE0 474 aaPredicted RBP2.54□□□□□ -2
USP47-211ENST00000531513 ATPIF1Q9UII2 106 aa2.54□□□□□ -2
USP47-211ENST00000531513 SLC22A13Q9Y226 551 aa2.54□□□□□ -2
USP47-211ENST00000531513 CHD2O14647 1828 aaKnown RBP2.54□□□□□ -2
USP47-211ENST00000531513 IGKV1-12A0A0C4DH73 117 aa2.53□□□□□ -2
USP47-211ENST00000531513 ZNF729A6NN14 1252 aaPredicted RBP2.53□□□□□ -2
USP47-211ENST00000531513 KCNK1O00180 336 aa2.53□□□□□ -2
USP47-211ENST00000531513 OR5F1O95221 314 aa2.53□□□□□ -2
USP47-211ENST00000531513 IGKV1D-12P01611 117 aa2.53□□□□□ -2
USP47-211ENST00000531513 IFNA16P05015 189 aa2.53□□□□□ -2
USP47-211ENST00000531513 IL3P08700 152 aa2.53□□□□□ -2
USP47-211ENST00000531513 CTXN2P0C2S0 81 aa2.53□□□□□ -2
USP47-211ENST00000531513 HIST1H1EP10412 219 aaKnown RBP2.53□□□□□ -2
USP47-211ENST00000531513 ZNF708P17019 499 aa2.53□□□□□ -2
USP47-211ENST00000531513 GABRA3P34903 492 aa2.53□□□□□ -2
USP47-211ENST00000531513 HSPA9P38646 679 aaKnown RBP2.53□□□□□ -2
USP47-211ENST00000531513 VBP1P61758 197 aa2.53□□□□□ -2
USP47-211ENST00000531513 RPS24P62847 133 aaKnown RBP2.53□□□□□ -2
USP47-211ENST00000531513 RBX1P62877 108 aa2.53□□□□□ -2
USP47-211ENST00000531513 PDK2Q15119 407 aa2.53□□□□□ -2
USP47-211ENST00000531513 MAPK14Q16539 360 aa2.53□□□□□ -2
USP47-211ENST00000531513 TMEM176BQ3YBM2 270 aaPredicted RBP2.53□□□□□ -2
USP47-211ENST00000531513 ACSBG2Q5FVE4 666 aa2.53□□□□□ -2
USP47-211ENST00000531513 CLVS2Q5SYC1 327 aa2.53□□□□□ -2
USP47-211ENST00000531513 LDLRAD2Q5SZI1 272 aa2.53□□□□□ -2
USP47-211ENST00000531513 N4BP2L1Q5TBK1 243 aaPredicted RBP2.53□□□□□ -2
USP47-211ENST00000531513 SLC51BQ86UW2 128 aa2.53□□□□□ -2
USP47-211ENST00000531513 STX12Q86Y82 276 aa2.53□□□□□ -2
USP47-211ENST00000531513 RPRMLQ8N4K4 120 aa2.53□□□□□ -2
USP47-211ENST00000531513 OR8K1Q8NGG5 319 aa2.53□□□□□ -2
USP47-211ENST00000531513 OR2V1Q8NHB1 315 aa2.53□□□□□ -2
USP47-211ENST00000531513 C9orf16Q9BUW7 83 aa2.53□□□□□ -2
USP47-211ENST00000531513 SCRT1Q9BWW7 348 aa2.53□□□□□ -2
USP47-211ENST00000531513 MED28Q9H204 178 aa2.53□□□□□ -2
USP47-211ENST00000531513 ZNF286AQ9HBT8 521 aa2.53□□□□□ -2
USP47-211ENST00000531513 XPNPEP1Q9NQW7 623 aa2.53□□□□□ -2
USP47-211ENST00000531513 CYTL1Q9NRR1 136 aa2.53□□□□□ -2
USP47-211ENST00000531513 KCNIP2Q9NS61 270 aa2.53□□□□□ -2
USP47-211ENST00000531513 DHCR7Q9UBM7 475 aaKnown RBP2.53□□□□□ -2
USP47-211ENST00000531513 PHLDA3Q9Y5J5 127 aa2.53□□□□□ -2
USP47-211ENST00000531513 SCN4AP35499 1836 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 BRWD3Q6RI45 1802 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 TTC21AQ8NDW8 1320 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 IGLV2-18A0A075B6J9 118 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 TRAV8-1A0A0A6YYK1 113 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 A0A1W2PQL4 384 aaPredicted RBP2.52□□□□□ -2.01
USP47-211ENST00000531513 C5orf49A4QMS7 147 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 TMEM114B3SHH9 223 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 H3BQ85 93 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 K7EQS6 105 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 NSA2O95478 260 aaKnown RBP2.52□□□□□ -2.01
USP47-211ENST00000531513 IGKV3-11P04433 115 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 IFNA6P05013 189 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 PFN1P07737 140 aaKnown RBP2.52□□□□□ -2.01
USP47-211ENST00000531513 GUSBP08236 651 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms