RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CHMP1AQ9HD42 196 aaPredicted RBP11.71□□□□□ -0.53
CPSF1-206ENST00000531480 POMT1Q9Y6A1 747 aa11.71□□□□□ -0.53
CPSF1-206ENST00000531480 TRAV18A0A075B6X5 111 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 FAM172BPA6NC97 362 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 TRDCB7Z8K6 153 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 GSTZ1O43708 216 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-206ENST00000531480 SSX5O60225 188 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 YPEL1O60688 119 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 RBBP9O75884 186 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 HTR1DP28221 377 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 DYNLT3P51808 116 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 ZNF134P52741 427 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 LGALS4P56470 323 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 ACTBP60709 375 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 ACTG1P63261 375 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 RGS21Q2M5E4 152 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 MORN2Q502X0 79 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 FAM53AQ6NSI3 398 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-206ENST00000531480 SLC25A48Q6ZT89 311 aaKnown RBP11.7□□□□□ -0.54
CPSF1-206ENST00000531480 UBALD1Q8TB05 177 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 YPEL2Q96QA6 119 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 C7orf50Q9BRJ6 194 aaKnown RBP11.7□□□□□ -0.54
CPSF1-206ENST00000531480 CABLES2Q9BTV7 478 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 OR2S2Q9NQN1 319 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 DPM3Q9P2X0 92 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 ZNF107Q9UII5 783 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-206ENST00000531480 FAM96BQ9Y3D0 163 aa11.7□□□□□ -0.54
CPSF1-206ENST00000531480 IGKV1-6A0A0C4DH72 117 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 DNAJC9-AS1A6NH13 148 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 OOSP1A8MZH6 123 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 ITGB1BP1O14713 200 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 SCTP09683 121 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 ZNF137PP52743 207 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 TAS2R20P59543 309 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 SRSF2Q01130 221 aaKnown RBP11.69□□□□□ -0.54
CPSF1-206ENST00000531480 ARFRP1Q13795 201 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 HERPUD1Q15011 391 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 SLC9A3R2Q15599 337 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 RBMS3Q6XE24 437 aaKnown RBP11.69□□□□□ -0.54
CPSF1-206ENST00000531480 OR4A4PQ8NGN8 299 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 PIFOQ8TCI5 191 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 NUDCD2Q8WVJ2 157 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 SSMEM1Q8WWF3 244 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 LEAP2Q969E1 77 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 ST6GALNAC6Q969X2 333 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 OCSTAMPQ9BR26 566 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 THAP7Q9BT49 309 aaPredicted RBP11.69□□□□□ -0.54
CPSF1-206ENST00000531480 SRRQ9GZT4 340 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 ABCB10Q9NRK6 738 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 ANAPC10Q9UM13 185 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 V9GYH0 126 aa11.69□□□□□ -0.54
CPSF1-206ENST00000531480 IGHV3-43A0A0B4J1X8 118 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 LEUTXA8MZ59 168 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 TOR1AO14656 332 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 HLA-DQB1P01920 261 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 LPLP06858 475 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 RNASE1P07998 156 aaKnown RBP11.68□□□□□ -0.54
CPSF1-206ENST00000531480 IGHV3-43DP0DP04 118 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 RCVRNP35243 200 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 GNG2P59768 71 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 UBA52P62987 128 aaKnown RBP11.68□□□□□ -0.54
CPSF1-206ENST00000531480 BAMBIQ13145 260 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 GNMTQ14749 295 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 LTC4SQ16873 150 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 CT45A1Q5HYN5 189 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 PRR18Q8N4B5 295 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 TOMM5Q8N4H5 51 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 OR52L2PQ8NGH6 319 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 CT45A3Q8NHU0 189 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 ZDHHC16Q969W1 377 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 GNG12Q9UBI6 72 aa11.68□□□□□ -0.54
CPSF1-206ENST00000531480 ZNF230Q9UIE0 474 aaPredicted RBP11.68□□□□□ -0.54
CPSF1-206ENST00000531480 AMMECR1Q9Y4X0 333 aaPredicted RBP11.68□□□□□ -0.54
CPSF1-206ENST00000531480 IGKV1D-8A0A087WSZ0 117 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 NAP1L6A6NFF2 107 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 FABP7O15540 132 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 HOXA3O43365 443 aaPredicted RBP11.67□□□□□ -0.54
CPSF1-206ENST00000531480 RGS11O94810 467 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 IGHV4-59P01825 116 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 CSF1P09603 554 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
CPSF1-206ENST00000531480 CEACAM3P40198 252 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 SSX2Q16385 188 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 TPTE2P1Q5T6R2 138 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 ZNF57Q68EA5 555 aaPredicted RBP11.67□□□□□ -0.54
CPSF1-206ENST00000531480 SNX29P2Q8IUI4 249 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 OR5R1Q8NH85 324 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 SMIM4Q8WVI0 70 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 AGMATQ9BSE5 352 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 DPAGT1Q9H3H5 408 aa11.67□□□□□ -0.54
CPSF1-206ENST00000531480 COL6A5A8TX70 2615 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 TRBV6-7A0A0A0MS04 114 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 J3QRK9 145 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 SLC31A2O15432 143 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 IGHV3-7P01780 117 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 GSTT2P0CG29 244 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 IL7P13232 177 aa11.66□□□□□ -0.54
CPSF1-206ENST00000531480 ZBTB25P24278 435 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms