RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 OR5T1Q8NG75 326 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 TRUB1Q8WWH5 349 aaKnown RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 ORAI1Q96D31 301 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 LGALS12Q96DT0 336 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 RHOVQ96L33 236 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 RDH12Q96NR8 316 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 MYCBPQ99417 103 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 TAF9BQ9HBM6 251 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 RANGRFQ9HD47 186 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 AMBNQ9NP70 447 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 PAK1IP1Q9NWT1 392 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 CNOT2Q9NZN8 540 aaKnown RBP7.08□□□□□ -1.28
NEDD8-206ENST00000531430 AP4S1Q9Y587 144 aa7.08□□□□□ -1.28
NEDD8-206ENST00000531430 A8MZ25 164 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 J3QRE1 110 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 BDKRB2P30411 391 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 ZNF137PP52743 207 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 NDPQ00604 133 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 TATDN3Q17R31 274 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 Q3ZCU0 254 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 STEAP3Q658P3 488 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 FAM131AQ6UXB0 335 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 GLDNQ6ZMI3 551 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-206ENST00000531430 LINC00596Q86U02 117 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 ABHD14AQ9BUJ0 271 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 JAM3Q9BX67 310 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 BANF2Q9H503 90 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 IFT22Q9H7X7 185 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 PLEKHA3Q9HB20 300 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 TMEM138Q9NPI0 162 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 GAB2Q9UQC2 676 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 ORC6Q9Y5N6 252 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 NUBP2Q9Y5Y2 271 aa7.07□□□□□ -1.28
NEDD8-206ENST00000531430 PLECQ15149 4684 aaKnown RBP7.07□□□□□ -1.28
NEDD8-206ENST00000531430 RRHO14718 337 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 ZNF780AO75290 641 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-206ENST00000531430 CNIH1O95406 144 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 BAG2O95816 211 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 MAS1P04201 325 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 EGR2P11161 476 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-206ENST00000531430 FSTP19883 344 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 ZP3P21754 424 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 SYNJ2BPP57105 145 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 GPR176Q14439 515 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 MEDAGQ5VYS4 303 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 PYHIN1Q6K0P9 492 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 TRAT1Q6PIZ9 186 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 TCTEX1D1Q8N7M0 179 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 NPBQ8NG41 125 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 OR2AK2Q8NG84 335 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 GRPEL2Q8TAA5 225 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 GPR148Q8TDV2 347 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 IL1F10Q8WWZ1 152 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 MUL1Q969V5 352 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 SELENOIQ9C0D9 397 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 GABARAPL1Q9H0R8 117 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 SPACA1Q9HBV2 294 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 METTL1Q9UBP6 276 aaKnown RBP7.06□□□□□ -1.28
NEDD8-206ENST00000531430 EXOGQ9Y2C4 368 aaKnown RBP7.06□□□□□ -1.28
NEDD8-206ENST00000531430 CEPT1Q9Y6K0 416 aa7.06□□□□□ -1.28
NEDD8-206ENST00000531430 A0A1W2PPK0 400 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 IZUMO1RA6ND01 250 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 ARPC1BO15143 372 aaKnown RBP7.05□□□□□ -1.28
NEDD8-206ENST00000531430 ST8SIA5O15466 376 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 RGS11O94810 467 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 BRI3O95415 125 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 FADS2O95864 444 aaKnown RBP7.05□□□□□ -1.28
NEDD8-206ENST00000531430 CD81P60033 236 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 MRPL28Q13084 256 aaKnown RBP7.05□□□□□ -1.28
NEDD8-206ENST00000531430 TMEM30BQ3MIR4 351 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 NHLRC3Q5JS37 347 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 C6orf141Q5SZD1 244 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 GLIPR1L1Q6UWM5 242 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 ODF3L1Q8IXM7 274 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 SYS1Q8N2H4 156 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 JAGN1Q8N5M9 183 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 SETD6Q8TBK2 473 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 RGP1Q92546 391 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-206ENST00000531430 TMEM106AQ96A25 262 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 GALMQ96C23 342 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 ZNF184Q99676 751 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-206ENST00000531430 GABARAPL3Q9BY60 117 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 HIPK2Q9H2X6 1198 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 SLA2Q9H6Q3 261 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 ERVK13-1Q9NX77 482 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 IL36GQ9NZH8 169 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 STEAP1Q9UHE8 339 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 OAZ3Q9UMX2 235 aa7.05□□□□□ -1.28
NEDD8-206ENST00000531430 SAA2-SAA4A0A096LPE2 208 aa7.04□□□□□ -1.28
NEDD8-206ENST00000531430 A0A0G2JLM5 398 aa7.04□□□□□ -1.28
NEDD8-206ENST00000531430 SHISA3A0PJX4 238 aa7.04□□□□□ -1.28
NEDD8-206ENST00000531430 ATP8B1O43520 1251 aa7.04□□□□□ -1.28
NEDD8-206ENST00000531430 YPEL1O60688 119 aa7.04□□□□□ -1.28
NEDD8-206ENST00000531430 CRTAPO75718 401 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-206ENST00000531430 TPPPO94811 219 aa7.04□□□□□ -1.28
NEDD8-206ENST00000531430 NDUFA3O95167 84 aa7.04□□□□□ -1.28
NEDD8-206ENST00000531430 CA2P00918 260 aa7.04□□□□□ -1.28
NEDD8-206ENST00000531430 SAA2P0DJI9 122 aaPredicted RBP7.04□□□□□ -1.28
NEDD8-206ENST00000531430 SNRPBP14678 240 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms