RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 LSM7Q9UK45 103 aaKnown RBP6.65□□□□□ -1.34
PTPRK-219ENST00000531050 FCN1O00602 326 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 PLPP3O14495 311 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 TMPRSS2O15393 492 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 SLC16A7O60669 478 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 TSPAN13O95857 204 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 LINC00869P0C866 280 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 CTLA4P16410 223 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 RRADP55042 308 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 FXYD4P59646 89 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 PRDX1Q06830 199 aaKnown RBP6.65□□□□□ -1.35
PTPRK-219ENST00000531050 FAM58AQ8N1B3 248 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 FAM19A2Q8N3H0 131 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 RPP25LQ8N5L8 163 aaKnown RBP6.65□□□□□ -1.35
PTPRK-219ENST00000531050 OR4A5Q8NH83 315 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 JMJD8Q96S16 334 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 DERL1Q9BUN8 251 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 PHF7Q9BWX1 381 aaPredicted RBP6.65□□□□□ -1.35
PTPRK-219ENST00000531050 NPFFR1Q9GZQ6 430 aa6.65□□□□□ -1.35
PTPRK-219ENST00000531050 FNDC4Q9H6D8 234 aaPredicted RBP6.65□□□□□ -1.35
PTPRK-219ENST00000531050 C2orf72A6NCS6 295 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 NRG2O14511 850 aaPredicted RBP6.64□□□□□ -1.35
PTPRK-219ENST00000531050 HMGB3O15347 200 aaKnown RBP6.64□□□□□ -1.35
PTPRK-219ENST00000531050 ADAM20O43506 726 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 NXPH3O95157 252 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 EGR4Q05215 589 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 NOGQ13253 232 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 PRTGQ2VWP7 1150 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 C12orf54Q6X4T0 127 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 OR4N2Q8NGD1 307 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 OR10G8Q8NGN5 311 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 OR2A1Q8NGT9 310 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 SCGB1C1Q8TD33 95 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 TAAR6Q96RI8 345 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 WDR61Q9GZS3 305 aaKnown RBP6.64□□□□□ -1.35
PTPRK-219ENST00000531050 SLC39A9Q9NUM3 307 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 TMEM74BQ9NUR3 256 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 HS3ST2Q9Y278 367 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 PCNX3Q9H6A9 2034 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 PRSS37A4D1T9 235 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 PGPEP1LA6NFU8 196 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 KIAA1324LA8MWY0 1029 aaPredicted RBP6.64□□□□□ -1.35
PTPRK-219ENST00000531050 J3KRW8 73 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 K7EP34 96 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 FOXS1O43638 330 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 NKX2-2O95096 273 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 TNFP01375 233 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 ZNF17P17021 662 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 DRD1P21728 446 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 IER3P46695 156 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 SERF2P84101 59 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 HSD52Q0P140 79 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 OR10J3Q5JRS4 329 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 BRICD5Q6PL45 260 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 GTF2H5Q6ZYL4 71 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 C1QL2Q7Z5L3 287 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 SPATA12Q7Z6I5 190 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 SHISA5Q8N114 240 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 OR2AE1Q8NHA4 323 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 TSKUQ8WUA8 353 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 SFXN3Q9BWM7 321 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 PLEKHJ1Q9NW61 149 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 FAM206AQ9NX38 181 aa6.64□□□□□ -1.35
PTPRK-219ENST00000531050 LTBP2Q14767 1821 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 C7orf71A4D174 169 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 H3BP45 60 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 BRI3O95415 125 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 CT62P0C5K7 136 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 EGR1P18146 543 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 TIMP3P35625 211 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 GUCA1AP43080 201 aaPredicted RBP6.63□□□□□ -1.35
PTPRK-219ENST00000531050 CA7P43166 264 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 MGAT2Q10469 447 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 TBR1Q16650 682 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 Q56UQ5 140 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 C9orf135Q5VTT2 229 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 ZNF324BQ6AW86 544 aaPredicted RBP6.63□□□□□ -1.35
PTPRK-219ENST00000531050 C6orf201Q7Z4U5 140 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.63□□□□□ -1.35
PTPRK-219ENST00000531050 ZNF525Q8N782 197 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 BORCS7Q96B45 105 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 SPIN2AQ99865 258 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 SPIN2BQ9BPZ2 258 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
PTPRK-219ENST00000531050 MOB1AQ9H8S9 216 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 PLEK2Q9NYT0 353 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 ARID1BQ8NFD5 2236 aaPredicted RBP6.63□□□□□ -1.35
PTPRK-219ENST00000531050 KIAA1549LQ6ZVL6 1849 aa6.63□□□□□ -1.35
PTPRK-219ENST00000531050 TRAV9-1A0A075B6T8 112 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.62□□□□□ -1.35
PTPRK-219ENST00000531050 SNURFLB1AK76 121 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 KLRC4-KLRK1H3BQV0 150 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 LATO43561 262 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 PAGE4O60829 102 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 CEBPDP49716 269 aaPredicted RBP6.62□□□□□ -1.35
PTPRK-219ENST00000531050 PLP1P60201 277 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 GNB1P62873 340 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 ZNF90Q03938 601 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 ARL16Q0P5N6 197 aa6.62□□□□□ -1.35
PTPRK-219ENST00000531050 RAB31Q13636 194 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms