RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 NKAPLQ5M9Q1 402 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 FAM27D1Q5T7N8 215 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 OGFRL1Q5TC84 451 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-205ENST00000531042 OR10K2Q6IF99 312 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 LRRTM1Q86UE6 522 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 MS4A15Q8N5U1 240 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 C4orf3Q8WVX3 66 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 GALMQ96C23 342 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 RITA1Q96K30 269 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 NEDD4LQ96PU5 975 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 YPEL2Q96QA6 119 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 NABP2Q9BQ15 211 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 SULT4A1Q9BR01 284 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 CHCHD6Q9BRQ6 235 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 MRPL20Q9BYC9 149 aaKnown RBP12.33□□□□□ -0.44
CPSF1-205ENST00000531042 LRRC42Q9Y546 428 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 TENM3Q9P273 2699 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 CASQ2O14958 399 aaPredicted RBP12.32□□□□□ -0.44
CPSF1-205ENST00000531042 RGS11O94810 467 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 VSIG8P0DPA2 414 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 CNTFRP26992 372 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 PPIFP30405 207 aaKnown RBP12.32□□□□□ -0.44
CPSF1-205ENST00000531042 ACTBP60709 375 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 HMGN3Q15651 99 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 C1orf100Q5SVJ3 147 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 C9orf66Q5T8R8 295 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 RNLSQ5VYX0 342 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 ZNF833PQ6ZTB9 187 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 MYOZ3Q8TDC0 251 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 PHYHIPQ92561 330 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
CPSF1-205ENST00000531042 HLA-DRB1P01911 266 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 CDK1P06493 297 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 OR3A3P47888 321 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
CPSF1-205ENST00000531042 FHL3Q13643 280 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 GLT8D1Q68CQ7 371 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 C6orf201Q7Z4U5 140 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 MND1Q9BWT6 205 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 TMEM59Q9BXS4 323 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 OR51J1Q9H342 316 aa12.31□□□□□ -0.44
CPSF1-205ENST00000531042 SAA2-SAA4A0A096LPE2 208 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 IGHV7-81A0A0B4J1V7 117 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 G3V318 75 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 ATP6V0E1O15342 81 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 NBR2O15453 112 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 SAA2P0DJI9 122 aaPredicted RBP12.3□□□□□ -0.44
CPSF1-205ENST00000531042 CD37P11049 281 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 HTR2CP28335 458 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 UNC119Q13432 240 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 KIAA0141Q14154 515 aaPredicted RBP12.3□□□□□ -0.44
CPSF1-205ENST00000531042 RBM48Q5RL73 367 aaKnown RBP12.3□□□□□ -0.44
CPSF1-205ENST00000531042 TMEM65Q6PI78 240 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 NPBQ8NG41 125 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 OR2AK2Q8NG84 335 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 OR11H1Q8NG94 326 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 UBE2E2Q96LR5 201 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 TMED9Q9BVK6 235 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 TM2D1Q9BX74 207 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 ANKRD60Q9BZ19 345 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 KLK15Q9H2R5 256 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.3□□□□□ -0.44
CPSF1-205ENST00000531042 ABRACLQ9P1F3 81 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 SCOCQ9UIL1 159 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 LSM4Q9Y4Z0 139 aaKnown RBP12.3□□□□□ -0.44
CPSF1-205ENST00000531042 WSB1Q9Y6I7 421 aa12.3□□□□□ -0.44
CPSF1-205ENST00000531042 SEC14L6B5MCN3 397 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 PTGES3LE9PB15 166 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 I3L521 148 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 NDUFA3O95167 84 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 NAPSAO96009 420 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 IGLV1-40P01703 118 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 SRMP19623 302 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 QRFPP83859 136 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 SPHARQ15513 63 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 C5orf64Q2M2E5 130 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 LIN54Q6MZP7 749 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 ZNF880Q6PDB4 577 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 CEACAM19Q7Z692 300 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 SVOPQ8N4V2 548 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 ZNF491Q8N8L2 437 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 IL1F10Q8WWZ1 152 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 NICN1Q9BSH3 213 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 KCNK15Q9H427 330 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 GNB4Q9HAV0 340 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 PARP11Q9NR21 331 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 STEAP1Q9UHE8 339 aa12.29□□□□□ -0.44
CPSF1-205ENST00000531042 LSM2Q9Y333 95 aaKnown RBP12.29□□□□□ -0.44
CPSF1-205ENST00000531042 TRAV41A0A0B4J266 112 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 TMEM14DPA8MWL7 114 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 SLC22A1O15245 554 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 ST8SIA5O15466 376 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 BLVRBP30043 206 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-205ENST00000531042 ECI1P42126 302 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 RUNX1Q01196 453 aa12.28□□□□□ -0.44
CPSF1-205ENST00000531042 HSD17B12Q53GQ0 312 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms