RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 OR5B21A6NL26 309 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 H0Y8G0 127 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 IGHV3-48P01763 117 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 ACSM6Q6P461 480 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 ARHGAP21Q5T5U3 1957 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 TRAV17A0A0B4J275 112 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 A0A1B0GV90 55 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 C17orf112F2Z3M2 114 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 J3QT63 122 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 DNASE2O00115 360 aaPredicted RBP10.59□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF737O75373 536 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 OR5G3P0C626 314 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 FGF12P61328 243 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 FOXO1Q12778 655 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 WDR25Q64LD2 544 aaPredicted RBP10.59□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 HS3ST6Q96QI5 342 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 TMEM222Q9H0R3 208 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 MPC1Q9Y5U8 109 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 CSPG4Q6UVK1 2322 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 NUDT19A8MXV4 375 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 G3V3Q6 166 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF17P17021 662 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 COX5AP20674 150 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 HLA-DRB3P79483 266 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 TMEM187Q14656 261 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF66Q6ZN08 573 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 GPR146Q96CH1 333 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 AQP10Q96PS8 301 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 EYSQ5T1H1 3165 aa10.59□□□□□ -0.71
SCN3B-206ENST00000530277 hCG_38984A0A1B0GV85 526 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF320A2RRD8 509 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 DEFA4P12838 97 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 SSTR5P35346 364 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 CSRP2Q16527 193 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 C10orf128Q5T292 105 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 FADS6Q8N9I5 356 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 OR10G4Q8NGN3 311 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 OR10G9Q8NGN4 311 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 OR10G7Q8NGN6 311 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 ADAMTS17Q8TE56 1095 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 MOB3AQ96BX8 217 aa10.58□□□□□ -0.71
SCN3B-206ENST00000530277 PIGBOS1A0A0B4J2F0 54 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 LILRA1O75019 489 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 PGLYRP1O75594 196 aaPredicted RBP10.58□□□□□ -0.72
SCN3B-206ENST00000530277 MT-CO2P00403 227 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 ACTR3CQ9C0K3 210 aaPredicted RBP10.58□□□□□ -0.72
SCN3B-206ENST00000530277 IGSF23A1L1A6 192 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 TSTD3H0UI37 97 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 TMPRSS2O15393 492 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 RAB5AP20339 215 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 RPL19P84098 196 aaKnown RBP10.58□□□□□ -0.72
SCN3B-206ENST00000530277 SRSF6Q13247 344 aaKnown RBP10.58□□□□□ -0.72
SCN3B-206ENST00000530277 TMEM54Q969K7 222 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 RAB39BQ96DA2 213 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 WFIKKN1Q96NZ8 548 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.58□□□□□ -0.72
SCN3B-206ENST00000530277 GLIPR1P48060 266 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 HES1Q14469 280 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 BAGE3Q86Y29 109 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 BAGE2Q86Y30 109 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 RAB40CQ96S21 281 aa10.58□□□□□ -0.72
SCN3B-206ENST00000530277 IGHV3-21A0A0B4J1V1 117 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 TRGV8A0A0C4DH27 118 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 C9orf172C9J069 976 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 CDS2O95674 445 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 PRB3Q04118 309 aaPredicted RBP10.57□□□□□ -0.72
SCN3B-206ENST00000530277 FOXC1Q12948 553 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 EIF3IQ13347 325 aaKnown RBP10.57□□□□□ -0.72
SCN3B-206ENST00000530277 FDCSPQ8NFU4 85 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 TECTBQ96PL2 329 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 FAM103A1Q9BTL3 118 aaKnown RBP10.57□□□□□ -0.72
SCN3B-206ENST00000530277 OR51I2Q9H344 312 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 PARP11Q9NR21 331 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 CACFD1Q9UGQ2 172 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 WDFY4Q6ZS81 3184 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 LDLRAD4O15165 306 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 Q0VFX4 171 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 RBMXL3Q8N7X1 1067 aaKnown RBP10.57□□□□□ -0.72
SCN3B-206ENST00000530277 OR4A4PQ8NGN8 299 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 OR10X1Q8NGY0 326 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 FAM210BQ96KR6 192 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 WIPF3A6NGB9 483 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 NPIPB13A6NJU9 1138 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 NPIPB4C9JG80 1138 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 PAGE4O60829 102 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 RPP30P78346 268 aaKnown RBP10.57□□□□□ -0.72
SCN3B-206ENST00000530277 DTD1Q8TEA8 209 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 RNF166Q96A37 237 aaPredicted RBP10.57□□□□□ -0.72
SCN3B-206ENST00000530277 C10orf35Q96D05 121 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 ATP5SQ99766 215 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 IER2Q9BTL4 223 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 GPR87Q9BY21 358 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 ALPK3Q96L96 1907 aa10.57□□□□□ -0.72
SCN3B-206ENST00000530277 LOC390937A0A1W2PQ73 354 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 B4E171 279 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 SEC11BP0C7V7 166 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 NTF3P20783 257 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 TSPAN7P41732 249 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 UCP2P55851 309 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms