RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	TNFRSF1A	P19438	455 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF766	Q5HY98	468 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF506	Q5JVG8	444 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	TMEM211	Q6ICI0	200 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	LAIR2	Q6ISS4	152 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	PQLC2	Q6ZP29	291 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	SFTPA1	Q8IWL2	248 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	TM4SF19	Q96DZ7	209 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	AMELY	Q99218	206 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	SMDT1	Q9H4I9	107 aa		6.65	□□□□□ -1.35
CTNND1-223	ENST00000529986	LIPT2	A6NK58	231 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	AGA	P20933	346 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	HYAL1	Q12794	435 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	TPRX1	Q8N7U7	411 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	MRGPRX3	Q96LB0	322 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	PGLYRP4	Q96LB8	373 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	SGK494	Q96LW2	274 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	SDHC	Q99643	169 aa	Predicted RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	MRPL13	Q9BYD1	178 aa	Known RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	HES7	Q9BYE0	225 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	GLRX2	Q9NS18	164 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	RPL36A-HNRNPH2	H7BZ11	118 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	TMPRSS2	O15393	492 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	GNG7	O60262	68 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	CD160	O95971	181 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	SRF	P11831	508 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	TNFAIP6	P98066	277 aa	Predicted RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	PMCHL1	Q16048	86 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	RND1	Q92730	232 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	SNRNP40	Q96DI7	357 aa	Known RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	UCN2	Q96RP3	112 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	NEU1	Q99519	415 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	HIST1H4G	Q99525	98 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	PAXX	Q9BUH6	204 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	GPR132	Q9UNW8	380 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	DTX4	Q9Y2E6	619 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	COL4A5	P29400	1685 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	MKRN2OS	H3BPM6	223 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	KBTBD11	O94819	623 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	REG1B	P48304	166 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	OIT3	Q8WWZ8	545 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	TMEM208	Q9BTX3	173 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	COL25A1	Q9BXS0	654 aa	Predicted RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	DNAJC4	Q9NNZ3	241 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	MYOZ1	Q9NP98	299 aa	Predicted RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	WIPI2	Q9Y4P8	454 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	GREB1L	Q9C091	1923 aa	Predicted RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	IGHV3OR15-7	A0A075B7D8	119 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	TRGV8	A0A0C4DH27	118 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	NPIPB9	F8W1W9	429 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	DNASE2	O00115	360 aa	Predicted RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	LINC01565	O15544	149 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	CTGF	P29279	349 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZFP36L2	P47974	494 aa	Known RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	OR1L1	Q8NH94	360 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	PTX4	Q96A99	478 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	PERP	Q96FX8	193 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	RASL11B	Q9BPW5	248 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	OPN3	Q9H1Y3	402 aa	Predicted RBP	6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	RBKS	Q9H477	322 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	SAP30L	Q9HAJ7	183 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	TMEM38B	Q9NVV0	291 aa		6.64	□□□□□ -1.35
CTNND1-223	ENST00000529986	HBZ	P02008	142 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	BGLAP	P02818	100 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZP1	P60852	638 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	SERF2	P84101	59 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	IZUMO4	Q1ZYL8	232 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	LAMTOR1	Q6IAA8	161 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	CADM4	Q8NFZ8	388 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	FAM131C	Q96AQ9	280 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	COA4	Q9NYJ1	87 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	KCNE5	Q9UJ90	142 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	MPC1	Q9Y5U8	109 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	LILRA5	A6NI73	299 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	LMO7DN	F2Z398	122 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	SCT	P09683	121 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	GABRG2	P18507	467 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	IL11	P20809	199 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	GLIPR1	P48060	266 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	EAF1	Q96JC9	268 aa	Predicted RBP	6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	CXXC4	Q9H2H0	198 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	SCN1A	P35498	2009 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	ZNF324	O75467	553 aa	Predicted RBP	6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	AGFG2	O95081	481 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	AREG	P15514	252 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	CBLN1	P23435	193 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	SPANXN1	Q5VSR9	72 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	MIC13	Q5XKP0	118 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	GUSBP11	Q6P575	273 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	GUCD1	Q96NT3	240 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	CHST5	Q9GZS9	411 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	SOX21	Q9Y651	276 aa	Predicted RBP	6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	COL11A1	P12107	1806 aa	Predicted RBP	6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986		J3QR06	171 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	KIR2DL1	P43626	348 aa	Predicted RBP	6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	KIR2DL2	P43627	348 aa	Predicted RBP	6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	HERPUD1	Q15011	391 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	CALHM1	Q8IU99	346 aa		6.63	□□□□□ -1.35
CTNND1-223	ENST00000529986	TMEM52	Q8NDY8	209 aa		6.63	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms