RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 CABLES2Q9BTV7 478 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 PRDM13Q9H4Q3 707 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 IFT46Q9NQC8 304 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 ANXA10Q9UJ72 324 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 MINOS1-NBL1R4GNA1 71 aa11.34□□□□□ -0.59
USF1-209ENST00000529476 LY6LH3BQJ8 138 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 HAX1O00165 279 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 RGS11O94810 467 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 LPLP06858 475 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 ZBTB25P24278 435 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 S100A5P33763 92 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 SSX2Q16385 188 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 CNPY1Q3B7I2 92 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 PLA1AQ53H76 456 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 RBMS3Q6XE24 437 aaKnown RBP11.33□□□□□ -0.6
USF1-209ENST00000529476 SLC25A48Q6ZT89 311 aaKnown RBP11.33□□□□□ -0.6
USF1-209ENST00000529476 LINC00311Q8N616 119 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 OR10X1Q8NGY0 326 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 ZNF418Q8TF45 676 aaPredicted RBP11.33□□□□□ -0.6
USF1-209ENST00000529476 SNAPC3Q92966 411 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 MALSU1Q96EH3 234 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 SCPEP1Q9HB40 452 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 ANAPC10Q9UM13 185 aa11.33□□□□□ -0.6
USF1-209ENST00000529476 AMMECR1Q9Y4X0 333 aaPredicted RBP11.33□□□□□ -0.6
USF1-209ENST00000529476 TRBV6-7A0A0A0MS04 114 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 LEUTXA8MZ59 168 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 TPPPO94811 219 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 IL18Q14116 193 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 DIAPH2-AS1Q14236 149 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 LY6G6FQ5SQ64 297 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 TPTE2P1Q5T6R2 138 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 Q6YL49 198 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 LDLRAD3Q86YD5 345 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 OR2AK2Q8NG84 335 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 OR6Q1Q8NGQ2 317 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 OR52I2Q8NH67 350 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 OR10J5Q8NHC4 309 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 SOSTQ9BQB4 213 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 ABHD14AQ9BUJ0 271 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 RDH8Q9NYR8 311 aa11.32□□□□□ -0.6
USF1-209ENST00000529476 FABP12A6NFH5 140 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 SULT1C2O00338 296 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 ST8SIA5O15466 376 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 HOXA3O43365 443 aaPredicted RBP11.31□□□□□ -0.6
USF1-209ENST00000529476 TCF21O43680 179 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 DIRAS3O95661 229 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 CEACAM3P40198 252 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 ARPC4P59998 168 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 HILS1P60008 231 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 DGCR2P98153 550 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 SRSF2Q01130 221 aaKnown RBP11.31□□□□□ -0.6
USF1-209ENST00000529476 BAMBIQ13145 260 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 KRTAP24-1Q3LI83 254 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 PYHIN1Q6K0P9 492 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 FAM131AQ6UXB0 335 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 LYG1Q8N1E2 194 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 C15orf40Q8WUR7 153 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 CREB3L1Q96BA8 519 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 DUX5Q96PT3 197 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 GINS4Q9BRT9 223 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 C11orf54Q9H0W9 315 aaPredicted RBP11.31□□□□□ -0.6
USF1-209ENST00000529476 MEGF9Q9H1U4 602 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 IFI27L2Q9H2X8 130 aa11.31□□□□□ -0.6
USF1-209ENST00000529476 DNAJC9-AS1A6NH13 148 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 VENTXO95231 258 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 CTXN2P0C2S0 81 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 NAT1P18440 290 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 IER3P46695 156 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 CCDC190Q86UF4 302 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 LYSMD2Q8IV50 215 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 ODF3L1Q8IXM7 274 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 H1FOOQ8IZA3 346 aaPredicted RBP11.3□□□□□ -0.6
USF1-209ENST00000529476 ZDHHC22Q8N966 263 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 FCAMRQ8WWV6 532 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 TOMM40LQ969M1 308 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 RPEQ96AT9 228 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 TOLLIPQ9H0E2 274 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 TNFRSF19Q9NS68 423 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 KLK11Q9UBX7 282 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 V9GYH0 126 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 ANK2Q01484 3957 aa11.3□□□□□ -0.6
USF1-209ENST00000529476 A0A0A6YYJ9 748 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 GABARAPH6UMI1 98 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 ITGB1BP1O14713 200 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 HSD17B6O14756 317 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 CTDSPLO15194 276 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 NFYAP23511 347 aaPredicted RBP11.29□□□□□ -0.6
USF1-209ENST00000529476 IL3RAP26951 378 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 HLA-DMAP28067 261 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 RCVRNP35243 200 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 OR3A3P47888 321 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 REG1BP48304 166 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 RAB13P51153 203 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 SLC9A3R2Q15599 337 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 LRRC75BQ2VPJ9 315 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms