RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ADAMTSL5Q6ZMM2 481 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 ABHD12Q8N2K0 398 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 GDPD1Q8N9F7 314 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 SUMF2Q8NBJ7 301 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 OR4D6Q8NGJ1 314 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 OR13A1Q8NGR1 328 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 DDB2Q92466 427 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 S100A13Q99584 98 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 DPCDQ9BVM2 203 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 CLEC7AQ9BXN2 247 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 BARHL1Q9BZE3 327 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 GAL3ST2Q9H3Q3 398 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 LINC00574Q9H8X3 128 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 ZNF286AQ9HBT8 521 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 OR6C3Q9NZP0 311 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 MRPS28Q9Y2Q9 187 aaKnown RBP6.78□□□□□ -1.32
SSBP3-212ENST00000528930 MINOS1-NBL1R4GNA1 71 aa6.78□□□□□ -1.32
SSBP3-212ENST00000528930 MEIKINA0A087WXM9 373 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 KBTBD11-OT1A0A1B0GTJ5 212 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 NPIPB11E5RHQ5 1161 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 CHST1O43916 411 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 OR7C1O76099 320 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-212ENST00000528930 C1QBP02746 253 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 GTF2F2P13984 249 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 MAPK3P27361 379 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-212ENST00000528930 DYNLT3P51808 116 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 NCS1P62166 190 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 TPBGQ13641 420 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 GPR176Q14439 515 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 MPV17LQ2QL34 196 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 PLA1AQ53H76 456 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 LIPKQ5VXJ0 399 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 TMEM91Q6ZNR0 172 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 ZNF367Q7RTV3 350 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 LINC00596Q86U02 117 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 LRRTM1Q86UE6 522 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 RTN4RL2Q86UN3 420 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 JAGN1Q8N5M9 183 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 ZNF565Q8N9K5 539 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 TMEM104Q8NE00 496 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 THRSPQ92748 146 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 FOXRED1Q96CU9 486 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-212ENST00000528930 MRPS24Q96EL2 167 aaKnown RBP6.77□□□□□ -1.33
SSBP3-212ENST00000528930 CYYR1Q96J86 154 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 TMED9Q9BVK6 235 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 CCDC90BQ9GZT6 254 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 ISYNA1Q9NPH2 558 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 PCDHB16Q9NRJ7 776 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 RCC2Q9P258 522 aaKnown RBP6.77□□□□□ -1.33
SSBP3-212ENST00000528930 FBLN5Q9UBX5 448 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 TCF19Q9Y242 345 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 HILPDAQ9Y5L2 63 aa6.77□□□□□ -1.33
SSBP3-212ENST00000528930 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.33
SSBP3-212ENST00000528930 TRAV39A0A0B4J263 110 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 A6NDX4 124 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A22PA8MWA6 464 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 LY6LH3BQJ8 138 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 IL1AP01583 271 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 UCHL1P09936 223 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 SPNP16150 400 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 SRMP19623 302 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 PSMB9P28065 219 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 HTR1DP28221 377 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 GLP1RP43220 463 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 KIR2DS4P43632 304 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 MAP2K4P45985 399 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 MLLT11Q13015 90 aaPredicted RBP6.76□□□□□ -1.33
SSBP3-212ENST00000528930 HLA-DRB5Q30154 266 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 C1orf100Q5SVJ3 147 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 AWAT2Q6E213 333 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 CEACAM19Q7Z692 300 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 GAPTQ8N292 157 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 NKAIN3Q8N8D7 197 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 DUSP18Q8NEJ0 188 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 LHFPL5Q8TAF8 219 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 ZNF596Q8TC21 504 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 MRGPRDQ8TDS7 321 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 PHYHIPQ92561 330 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 UFD1Q92890 307 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 SDHCQ99643 169 aaPredicted RBP6.76□□□□□ -1.33
SSBP3-212ENST00000528930 UQCC2Q9BRT2 126 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 BANF2Q9H503 90 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 CALYQ9NYX4 217 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 IDI2-AS1Q9NZ38 188 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 DPM3Q9P2X0 92 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 SIGLEC9Q9Y336 463 aa6.76□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A10PA6NDY2 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A18PA6NE21 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A16PA6NEW6 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A20PA6NIJ5 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A7PA6NKC0 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A12PA8MX19 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A5PA8MXJ8 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A23PA8MXZ1 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 LEUTXA8MZ59 168 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 C15orf65H3BRN8 121 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 BUB1B-PAK6H3BSN5 160 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 J3QR06 171 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 HLA-DQB1P01920 261 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms