RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 MXD1Q05195 221 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 SFXN4Q6P4A7 337 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 MOB3BQ86TA1 216 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 SETD6Q8TBK2 473 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 IL1F10Q8WWZ1 152 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 M0QZK8 103 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 MFNGO00587 321 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 LANCL1O43813 399 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 TIMM50Q3ZCQ8 353 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 ODF3L1Q8IXM7 274 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 WIPF2Q8TF74 440 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-211ENST00000528563 WNT10AQ9GZT5 417 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 ATG5Q9H1Y0 275 aa13.42□□□□□ -0.26
HIF3A-211ENST00000528563 IGKV1D-33P01593 117 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 IGKV1-33P01594 117 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 SCTP09683 121 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 SNRPBP14678 240 aaKnown RBP13.41□□□□□ -0.26
HIF3A-211ENST00000528563 HIST1H1DP16402 221 aaKnown RBP13.41□□□□□ -0.26
HIF3A-211ENST00000528563 GNB3P16520 340 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 CD1BP29016 333 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 HNF4GQ14541 408 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 HERPUD1Q15011 391 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 LYG1Q8N1E2 194 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 KLHDC1Q8N7A1 406 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 ABHD14AQ9BUJ0 271 aa13.41□□□□□ -0.26
HIF3A-211ENST00000528563 TRRAPQ9Y4A5 3859 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 IGHV3-72A0A0B4J1Y9 119 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 SERPINE3A8MV23 424 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 ZNF736B4DX44 427 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-211ENST00000528563 TRDCB7Z8K6 153 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 TXNL1O43396 289 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 AIREO43918 545 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 CD3GP09693 182 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 VSIG10L2P0DP72 767 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 HLA-DRB3P79483 266 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 HES1Q14469 280 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 ABCA11PQ4W5N1 156 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 TGIF2LXQ8IUE1 241 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 IZUMO1Q8IYV9 350 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 Q8N6K4 173 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 OR2AK2Q8NG84 335 aa13.4□□□□□ -0.26
HIF3A-211ENST00000528563 EAF1Q96JC9 268 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-211ENST00000528563 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.4□□□□□ -0.26
HIF3A-211ENST00000528563 IGKV1-6A0A0C4DH72 117 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 ITGB1BP1O14713 200 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 TMEM11P17152 192 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 ZBTB25P24278 435 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 CEACAM6P40199 344 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 SCAND1P57086 179 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 CDNFQ49AH0 187 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 LGALS14Q8TCE9 139 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 AGMATQ9BSE5 352 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 PARP12Q9H0J9 701 aaKnown RBP13.39□□□□□ -0.27
HIF3A-211ENST00000528563 IFI27L2Q9H2X8 130 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 OR1A1Q9P1Q5 309 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 SLC23A1Q9UHI7 598 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 MOB4Q9Y3A3 225 aa13.39□□□□□ -0.27
HIF3A-211ENST00000528563 A0A075B6Q4 140 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 TMEM127O75204 238 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 LPLP06858 475 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 FCGR3AP08637 254 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 TGFBR1P36897 503 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 RPS19P39019 145 aaKnown RBP13.38□□□□□ -0.27
HIF3A-211ENST00000528563 OR3A3P47888 321 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 MRPS15P82914 257 aaKnown RBP13.38□□□□□ -0.27
HIF3A-211ENST00000528563 ARL6IP1Q15041 203 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 TMEM95Q3KNT9 176 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 IDNKQ5T6J7 187 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 C5orf56Q8N8D9 126 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 OR5H6Q8NGV6 325 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 OR2T10Q8NGZ9 312 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 PLSCR3Q9NRY6 295 aa13.38□□□□□ -0.27
HIF3A-211ENST00000528563 ELF5Q9UKW6 265 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-211ENST00000528563 SH2D7A6NKC9 451 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-211ENST00000528563 FGF16O43320 207 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 MOSP00540 346 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 VDAC2P45880 294 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-211ENST00000528563 SRSF7Q16629 238 aaKnown RBP eCLIP13.37□□□□□ -0.27
HIF3A-211ENST00000528563 ZNF833PQ6ZTB9 187 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 OR4A4PQ8NGN8 299 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 ZNF251Q9BRH9 671 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 TOLLIPQ9H0E2 274 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 C11orf54Q9H0W9 315 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-211ENST00000528563 GHITMQ9H3K2 345 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 RHBDL2Q9NX52 303 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 ETV7Q9Y603 341 aa13.37□□□□□ -0.27
HIF3A-211ENST00000528563 SAA2-SAA4A0A096LPE2 208 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 M0QZ24 198 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 ST8SIA5O15466 376 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 FABP7O15540 132 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 HSPA12AO43301 675 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 SCGNO76038 276 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 SAA2P0DJI9 122 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-211ENST00000528563 SMIM18P0DKX4 95 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 LSM3P62310 102 aaKnown RBP13.36□□□□□ -0.27
HIF3A-211ENST00000528563 ARFRP1Q13795 201 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 ARSJQ5FYB0 599 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-211ENST00000528563 Q6ZS49 121 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 C11orf44Q8N8P7 122 aa13.36□□□□□ -0.27
HIF3A-211ENST00000528563 OR13F1Q8NGS4 319 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms