RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TRMT12Q53H54 448 aaKnown RBP4.08□□□□□ -1.76
PCF11-202ENST00000528336 XKRXQ6PP77 449 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 COMMD7Q86VX2 200 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 CLVS1Q8IUQ0 354 aaPredicted RBP4.08□□□□□ -1.76
PCF11-202ENST00000528336 C1orf158Q8N1D5 194 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 CADM2Q8N3J6 435 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 ZFP90Q8TF47 636 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 SRSF12Q8WXF0 261 aaKnown RBP4.08□□□□□ -1.76
PCF11-202ENST00000528336 TAMM41Q96BW9 452 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 PITX2Q99697 317 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 SIGMAR1Q99720 223 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 ZNF717Q9BY31 904 aaPredicted RBP4.08□□□□□ -1.76
PCF11-202ENST00000528336 TRIM4Q9C037 500 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 ALX4Q9H161 411 aaPredicted RBP4.08□□□□□ -1.76
PCF11-202ENST00000528336 CLMPQ9H6B4 373 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 BIN3Q9NQY0 253 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 NUBP2Q9Y5Y2 271 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 SPTBN5Q9NRC6 3674 aaKnown RBP4.08□□□□□ -1.76
PCF11-202ENST00000528336 BDP1A6H8Y1 2624 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 PTPRDP23468 1912 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 VCANP13611 3396 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 IGHV3OR16-13A0A075B7E8 117 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 TRAV19A0A0A6YYK7 116 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 A0A1W2PQ67 120 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 TSTD3H0UI37 97 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 NPIPB7O75200 414 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 CA11O75493 328 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 IFNA1P01562 189 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 OR5H8P0DN80 308 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 TCN2P20062 427 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 PSMB1P20618 241 aaKnown RBP4.07□□□□□ -1.76
PCF11-202ENST00000528336 PSMB9P28065 219 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 SLC6A1P30531 599 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 TAS2R43P59537 309 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 RAP1BP61224 184 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 SLC7A9P82251 487 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 HTR4Q13639 388 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 QPRTQ15274 297 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 TSNQ15631 228 aaKnown RBP4.07□□□□□ -1.76
PCF11-202ENST00000528336 FAM78AQ5JUQ0 283 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 AVPI1Q5T686 147 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 C1orf146Q5VVC0 180 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 ANKRD22Q5VYY1 191 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 STEAP4Q687X5 459 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 WDR59Q6PJI9 974 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 ZNF571Q7Z3V5 609 aaPredicted RBP4.07□□□□□ -1.76
PCF11-202ENST00000528336 OR1L8Q8NGR8 309 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 OR10K1Q8NGX5 313 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 OR10J6PQ8NGY7 276 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 OR1P1Q8NH06 330 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 NEIL3Q8TAT5 605 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 C11orf40Q8WZ69 217 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 ZHX1-C8orf76Q96EF9 292 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 CPNE2Q96FN4 548 aaPredicted RBP4.07□□□□□ -1.76
PCF11-202ENST00000528336 BTF3L4Q96K17 158 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 FAAP24Q9BTP7 215 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 MED18Q9BUE0 208 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 DCSTAMPQ9H295 470 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 NMNAT1Q9HAN9 279 aaPredicted RBP4.07□□□□□ -1.76
PCF11-202ENST00000528336 ANGPT4Q9Y264 503 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 POLR1DQ9Y2S0 133 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.07□□□□□ -1.76
PCF11-202ENST00000528336 PRELID3BQ9Y3B1 194 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 C5orf42Q9H799 3197 aa4.07□□□□□ -1.76
PCF11-202ENST00000528336 IGHV1OR15-1A0A075B7D0 117 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 A0A0G2JMP0 313 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 A0A0U1RQV1 116 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 ZFP92A6NM28 416 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 DHRS7CA6NNS2 312 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 BTNL10A8MVZ5 291 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 EVPLLA8MZ36 301 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 MIF4GDA9UHW6 222 aaKnown RBP4.06□□□□□ -1.76
PCF11-202ENST00000528336 TCAPO15273 167 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 RP2O75695 350 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 S1PR2O95136 353 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 MMP7P09237 267 aaPredicted RBP4.06□□□□□ -1.76
PCF11-202ENST00000528336 HIST1H1TP22492 207 aaPredicted RBP4.06□□□□□ -1.76
PCF11-202ENST00000528336 MYL9P24844 172 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 OR3A4PP47883 348 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 OR1E2P47887 323 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 SRP9P49458 86 aaKnown RBP4.06□□□□□ -1.76
PCF11-202ENST00000528336 MTPNP58546 118 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 GNG3P63215 75 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 HIST1H3AP68431 136 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 H3F3AP84243 136 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 PSG4Q00888 419 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 IFITM2Q01629 132 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 SMAGPQ0VAQ4 97 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 ZNF630Q2M218 657 aaPredicted RBP4.06□□□□□ -1.76
PCF11-202ENST00000528336 OTPQ5XKR4 325 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 TMEM215Q68D42 235 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 SPNS3Q6ZMD2 512 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 DNM1P46Q6ZS02 220 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 RASSF6Q6ZTQ3 369 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 HIST2H3AQ71DI3 136 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 GALNT10Q86SR1 603 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 CEND1Q8N111 149 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 FAM71E2Q8N5Q1 922 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 COX18Q8N8Q8 333 aa4.06□□□□□ -1.76
PCF11-202ENST00000528336 C11orf72Q8NBR9 251 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms