RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 HTD2P86397 168 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 MLLT11Q13015 90 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-211ENST00000527739 RAB11BQ15907 218 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 FOXB2Q5VYV0 432 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 REC114Q7Z4M0 266 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 OR51D1Q8NGF3 324 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 MRAPQ8TCY5 172 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 TM2D1Q9BX74 207 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 PLSCR3Q9NRY6 295 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 STEAP1Q9UHE8 339 aa15.21■□□□□ 0.03
CAPN1-211ENST00000527739 SOCS1O15524 211 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 YPEL1O60688 119 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 CPEP16870 476 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 QRFPP83859 136 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 LSAMPQ13449 338 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 C18orf65Q6ZTR6 163 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 OR2W3Q7Z3T1 314 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 OR2AK2Q8NG84 335 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 OR8H1Q8NGG4 311 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 YPEL2Q96QA6 119 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 GFI1Q99684 422 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 NOTCH3Q9UM47 2321 aa15.2■□□□□ 0.02
CAPN1-211ENST00000527739 SLC17A2O00624 439 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 SLC2A2P11168 524 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-211ENST00000527739 SOX6P35712 828 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 OR3A3P47888 321 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 CLDN12P56749 244 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 FABP5Q01469 135 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 MMDQ15546 238 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 HMGN3Q15651 99 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 PNLIPRP3Q17RR3 467 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 TEX38Q6PEX7 206 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 C8orf86Q6ZUL3 223 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 COMMD1Q8N668 190 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 KLHL30-AS1Q8NEE0 82 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 GON7Q9BXV9 100 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 MRPL20Q9BYC9 149 aaKnown RBP15.19■□□□□ 0.02
CAPN1-211ENST00000527739 LPAR5Q9H1C0 372 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 ZFP57Q9NU63 452 aa15.19■□□□□ 0.02
CAPN1-211ENST00000527739 A0A0A6YYD4 124 aa15.18■□□□□ 0.02
CAPN1-211ENST00000527739 RRP9O43818 475 aaKnown RBP15.18■□□□□ 0.02
CAPN1-211ENST00000527739 CD37P11049 281 aa15.18■□□□□ 0.02
CAPN1-211ENST00000527739 SVOPQ8N4V2 548 aa15.18■□□□□ 0.02
CAPN1-211ENST00000527739 RCC1LQ96I51 464 aaKnown RBP15.18■□□□□ 0.02
CAPN1-211ENST00000527739 HSPB9Q9BQS6 159 aa15.18■□□□□ 0.02
CAPN1-211ENST00000527739 ZNF251Q9BRH9 671 aa15.18■□□□□ 0.02
CAPN1-211ENST00000527739 HDHD3Q9BSH5 251 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-211ENST00000527739 RIMS4Q9H426 269 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-211ENST00000527739 ACOT13Q9NPJ3 140 aa15.18■□□□□ 0.02
CAPN1-211ENST00000527739 AURKAIP1Q9NWT8 199 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-211ENST00000527739 AK3Q9UIJ7 227 aa15.18■□□□□ 0.02
CAPN1-211ENST00000527739 BLOC1S6Q9UL45 172 aa15.18■□□□□ 0.02
CAPN1-211ENST00000527739 ST8SIA5O15466 376 aa15.17■□□□□ 0.02
CAPN1-211ENST00000527739 NAPSAO96009 420 aa15.17■□□□□ 0.02
CAPN1-211ENST00000527739 VDAC1P21796 283 aa15.17■□□□□ 0.02
CAPN1-211ENST00000527739 VEGFCP49767 419 aa15.17■□□□□ 0.02
CAPN1-211ENST00000527739 HES5Q5TA89 166 aa15.17■□□□□ 0.02
CAPN1-211ENST00000527739 MRPL41Q8IXM3 137 aaKnown RBP15.17■□□□□ 0.02
CAPN1-211ENST00000527739 ODF3L1Q8IXM7 274 aa15.17■□□□□ 0.02
CAPN1-211ENST00000527739 NABP2Q9BQ15 211 aa15.17■□□□□ 0.02
CAPN1-211ENST00000527739 ZNF107Q9UII5 783 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-211ENST00000527739 V9GY05 133 aa15.17■□□□□ 0.02
CAPN1-211ENST00000527739 SAA2-SAA4A0A096LPE2 208 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 HSPA12AO43301 675 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 RPLP1P05386 114 aaKnown RBP15.16■□□□□ 0.02
CAPN1-211ENST00000527739 SAA2P0DJI9 122 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-211ENST00000527739 RAB25P57735 213 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 ACTBP60709 375 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 C2orf76Q3KRA6 126 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 CXorf66Q5JRM2 361 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-211ENST00000527739 LCNL1Q6ZST4 164 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 MOB1BQ7L9L4 216 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 ZNF367Q7RTV3 350 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 ZNF695Q8IW36 515 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 FAM71E2Q8N5Q1 922 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 LINC00482Q8N8I6 264 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 FAM3DQ96BQ1 224 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 SLC23A1Q9UHI7 598 aa15.16■□□□□ 0.02
CAPN1-211ENST00000527739 KMT2CQ8NEZ4 4911 aaKnown RBP15.16■□□□□ 0.02
CAPN1-211ENST00000527739 PDCD5O14737 125 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 DENRO43583 198 aaKnown RBP15.15■□□□□ 0.02
CAPN1-211ENST00000527739 DUS4LO95620 317 aaKnown RBP15.15■□□□□ 0.02
CAPN1-211ENST00000527739 CEACAM6P40199 344 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 MYCNOSP40205 109 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 RANBP1P43487 201 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 THBS3P49746 956 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 PSMD7P51665 324 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 ETV3LQ6ZN32 361 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 ZNF833PQ6ZTB9 187 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 FAM89BQ8N5H3 189 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 ARHGAP5-AS1Q96IT6 56 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 RITA1Q96K30 269 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 DUX3Q96PT4 197 aa15.15■□□□□ 0.02
CAPN1-211ENST00000527739 RAB29O14966 203 aa15.14■□□□□ 0.01
CAPN1-211ENST00000527739 CNTFRP26992 372 aa15.14■□□□□ 0.01
CAPN1-211ENST00000527739 MRPS15P82914 257 aaKnown RBP15.14■□□□□ 0.01
CAPN1-211ENST00000527739 TBCEQ15813 527 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-211ENST00000527739 RPL39P5Q59GN2 51 aa15.14■□□□□ 0.01
CAPN1-211ENST00000527739 LY6G6FQ5SQ64 297 aa15.14■□□□□ 0.01
CAPN1-211ENST00000527739 ZNF880Q6PDB4 577 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms