RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 OR2Y1Q8NGV0 311 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 OR10J5Q8NHC4 309 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 RAB40CQ96S21 281 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 SSX3Q99909 188 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 PSENENQ9NZ42 101 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 CACNG5Q9UF02 275 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 ATP23Q9Y6H3 246 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 PCSK5Q92824 1860 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 PHOX2AO14813 284 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 NAPSAO96009 420 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 WT1P19544 449 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-208ENST00000527323 DDTP30046 118 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 FGF12P61328 243 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 CLN3Q13286 438 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 SP5Q6BEB4 398 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-208ENST00000527323 PRR18Q8N4B5 295 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 OR10D3Q8NH80 312 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 OR2V1Q8NHB1 315 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 PSMF1Q92530 271 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 IMMP1LQ96LU5 166 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 GAB2Q9UQC2 676 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 TRAV1-1A0A0B4J248 108 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 ZNF716A6NP11 495 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 CLEC12BQ2HXU8 276 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 WIPI1Q5MNZ9 446 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-208ENST00000527323 PPP1R32Q7Z5V6 425 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 ABHD3Q8WU67 409 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 MTCH1Q9NZJ7 389 aa10.66□□□□□ -0.7
CAPN1-208ENST00000527323 FREM1Q5H8C1 2179 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 TGOLN2O43493 480 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 TUSC2O75896 110 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 OPN1MWP04001 364 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 OPN1MW2P0DN77 364 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 OPN1MW3P0DN78 364 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 OR10G4Q8NGN3 311 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 THOC3Q96J01 351 aaKnown RBP10.65□□□□□ -0.7
CAPN1-208ENST00000527323 ZNF488Q96MN9 340 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 ROS1P08922 2347 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 BSNQ9UPA5 3926 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 ZFYVE26Q68DK2 2539 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 C5orf49A4QMS7 147 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A10PA6NDY2 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A18PA6NE21 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A16PA6NEW6 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A20PA6NIJ5 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A8PA6NJQ4 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A7PA6NKC0 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A22PA8MWA6 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A12PA8MX19 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A5PA8MXJ8 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A23PA8MXZ1 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 C3orf80F5H4A9 247 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 TM4SF5O14894 197 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 SYNGR2O43760 224 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 IFNA1P01562 189 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A15PP0C7V4 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A13PP0C7W8 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A14PP0C7W9 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 FAM90A24PP0C7X0 464 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 IL2RGP31785 369 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 SPANXN5Q5MJ07 72 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 Q6ZRM9 215 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 BEND4Q6ZU67 534 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 OR10A7Q8NGE5 316 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 IL22RA2Q969J5 263 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 RCC1LQ96I51 464 aaKnown RBP10.65□□□□□ -0.7
CAPN1-208ENST00000527323 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 SLC39A9Q9NUM3 307 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 VAX2Q9UIW0 290 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 PITPNC1Q9UKF7 332 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
CAPN1-208ENST00000527323 TRAV39A0A0B4J263 110 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 HMGB3O15347 200 aaKnown RBP10.64□□□□□ -0.71
CAPN1-208ENST00000527323 Q6ZS49 121 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 REC114Q7Z4M0 266 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ZDHHC23Q8IYP9 409 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 CA5BP1Q8WTZ4 195 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 LHX4Q969G2 390 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF845Q96IR2 970 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-208ENST00000527323 SMIM7Q9BQ49 75 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 C1QTNF5Q9BXJ0 243 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 CRIM1Q9NZV1 1036 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 OR2W1Q9Y3N9 320 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 LOC102723996A0A087X1L8 192 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 MAP1LC3B2A6NCE7 125 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ARGFXA6NJG6 315 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 SYNGR1O43759 233 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF737O75373 536 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 RFPL3SP0C7P2 107 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF883P0CG24 379 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 SRD5A2P31213 254 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 MDH2P40926 338 aaKnown RBP10.64□□□□□ -0.71
CAPN1-208ENST00000527323 RND2P52198 227 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 SSTP61278 116 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 TESK1Q15569 626 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF726P1Q15940 193 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 KRTAP27-1Q3LI81 207 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 WDR25Q64LD2 544 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-208ENST00000527323 UNQ6494/PRO21346Q6UXR6 183 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms