RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 ANAPC13Q9BS18 74 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 TAPBPLQ9BX59 468 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 POMKQ9H5K3 350 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 DHX35Q9H5Z1 703 aaKnown RBP2.4□□□□□ -2.03
CD44-223ENST00000526553 WDR54Q9H977 334 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 INIPQ9NRY2 104 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 ATP6V1DQ9Y5K8 247 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 SLC22A7Q9Y694 548 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 DOCK8Q8NF50 2099 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 MYO3BQ8WXR4 1341 aa2.4□□□□□ -2.03
CD44-223ENST00000526553 ARAP2Q8WZ64 1704 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 CDK5RAP2Q96SN8 1893 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 PLXNA1Q9UIW2 1896 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 LAMA3Q16787 3333 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 ANKRD12Q6UB98 2062 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 IGHV2-26A0A0B4J1V2 119 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 C1orf232A0A0U1RR37 186 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 GOLGA6L10A6NI86 522 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 LGALS9O00182 355 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 MFNGO00587 321 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 TCF21O43680 179 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 CNMDO75829 334 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 ORM1P02763 201 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 IGKV5-2P06315 115 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 CD40LGP29965 261 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 PYCR1P32322 319 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 ZNHIT3Q15649 155 aaPredicted RBP2.39□□□□□ -2.03
CD44-223ENST00000526553 ZNF773Q6PK81 442 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 CASP12Q6UXS9 341 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 BOD1L2Q8IYS8 172 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 LFNGQ8NES3 379 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 TWIST2Q8WVJ9 160 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 OLFM3Q96PB7 478 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 DCUN1D5Q9BTE7 237 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 PRO3102Q9H379 93 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 TAS2R13Q9NYV9 303 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 RBM12B-AS1Q9P1G2 102 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 FBXL3Q9UKT7 428 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 PRUNE2Q8WUY3 3088 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 SSC5DA1L4H1 1573 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 COL1A1P02452 1464 aaPredicted RBP2.39□□□□□ -2.03
CD44-223ENST00000526553 TTC28Q96AY4 2481 aa2.39□□□□□ -2.03
CD44-223ENST00000526553 MED23Q9ULK4 1368 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 IGHV3OR16-8A0A075B7F1 116 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 A0A0A6YYH2 397 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 IZUMO1RA6ND01 250 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 A6NJ64 397 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 ZNF98A6NK75 572 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 EFCAB9A8MZ26 197 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 F5H5K5 113 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 H3BP45 60 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 RPL36A-HNRNPH2H7BZ11 118 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 SLC31A1O15431 190 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 MPZL2O60487 215 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 PSIP1O75475 530 aaKnown RBP2.38□□□□□ -2.03
CD44-223ENST00000526553 CDRT1O95170 752 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 IGLV7-43P04211 117 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 OR5AC1P0C628 307 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 RD3LP0DJH9 198 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 PTHLHP12272 177 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 MLNP12872 115 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 SPNP16150 400 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 PVALBP20472 110 aaPredicted RBP2.38□□□□□ -2.03
CD44-223ENST00000526553 M6PRP20645 277 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 HLA-DMAP28067 261 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 SCN1AP35498 2009 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 ZNF83P51522 516 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 DLX6P56179 175 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 RAB25P57735 213 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 UBE2G2P60604 165 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 SDHAF4Q5VUM1 108 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 ZFAND6Q6FIF0 208 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 FAM45BPQ6NSW5 357 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 C16orf47Q6ZP98 133 aaPredicted RBP2.38□□□□□ -2.03
CD44-223ENST00000526553 SLC13A5Q86YT5 568 aaPredicted RBP2.38□□□□□ -2.03
CD44-223ENST00000526553 ZNF426Q9BUY5 554 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 C11orf49Q9H6J7 331 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 LINC00574Q9H8X3 128 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 FAM60AQ9NP50 221 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 NKIRAS1Q9NYS0 192 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 SCML1Q9UN30 329 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 LAMA2P24043 3122 aaKnown RBP2.38□□□□□ -2.03
CD44-223ENST00000526553 PTPRFP10586 1907 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 MYH2Q9UKX2 1941 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 A0A1B0GUL6 1792 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 EYSQ5T1H1 3165 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 VCANP13611 3396 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 ATAD5Q96QE3 1844 aa2.38□□□□□ -2.03
CD44-223ENST00000526553 GBF1Q92538 1859 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 TMEM131Q92545 1883 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 FABP12A6NFH5 140 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 J3QLI3 93 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 NRASP01111 189 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 HRASP01112 189 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 KRASP01116 189 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 NEFHP12036 1026 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 F8A1P23610 371 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 MSNP26038 577 aaKnown RBP2.37□□□□□ -2.03
CD44-223ENST00000526553 RCVRNP35243 200 aa2.37□□□□□ -2.03
CD44-223ENST00000526553 FAM3AP98173 230 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms