RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 OR13F1Q8NGS4 319 aa12.98□□□□□ -0.33
SSSCA1-202ENST00000526433 OR2T6Q8NHC8 308 aa12.98□□□□□ -0.33
SSSCA1-202ENST00000526433 RBM14Q96PK6 669 aaKnown RBP12.98□□□□□ -0.33
SSSCA1-202ENST00000526433 SLC25A33Q9BSK2 321 aa12.98□□□□□ -0.33
SSSCA1-202ENST00000526433 PRSS22Q9GZN4 317 aa12.98□□□□□ -0.33
SSSCA1-202ENST00000526433 TRDCB7Z8K6 153 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 OR2F2O95006 317 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 ZNF137PP52743 207 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 SCAND1P57086 179 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 ARFRP1Q13795 201 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 ARL6IP1Q15041 203 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 LYG1Q8N1E2 194 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 RTN4IP1Q8WWV3 396 aaPredicted RBP12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 AKR1E2Q96JD6 320 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 ABHD14AQ9BUJ0 271 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 ZNF702PQ9H963 129 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 RHBDL2Q9NX52 303 aa12.97□□□□□ -0.33
SSSCA1-202ENST00000526433 IGHV3-72A0A0B4J1Y9 119 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 SERPINE3A8MV23 424 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 TMEM127O75204 238 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 LPLP06858 475 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 TALDO1P37837 337 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 CEACAM6P40199 344 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 HES1Q14469 280 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 HABP2Q14520 560 aaPredicted RBP12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 HNF4GQ14541 408 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 Q6ZS46 218 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 TGIF2LXQ8IUE1 241 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 CROCCP3Q8IVE0 287 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 Q8N2B8 174 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 OR2AK2Q8NG84 335 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 MRPS26Q9BYN8 205 aaKnown RBP12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 SLC23A1Q9UHI7 598 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 ELF5Q9UKW6 265 aaPredicted RBP12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 ETV7Q9Y603 341 aa12.96□□□□□ -0.33
SSSCA1-202ENST00000526433 HSPA12AO43301 675 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 LANCL1O43813 399 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 SCGNO76038 276 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 IGKV1D-33P01593 117 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 IGKV1-33P01594 117 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 FCGR3AP08637 254 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 ZBTB25P24278 435 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 NCS1P62166 190 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 EBI3Q14213 229 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 C11orf88Q6PI97 169 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 ODF3L1Q8IXM7 274 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 OR1A1Q9P1Q5 309 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 ZNF230Q9UIE0 474 aaPredicted RBP12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 SPATA2Q9UM82 520 aa12.95□□□□□ -0.34
SSSCA1-202ENST00000526433 IGKV1-6A0A0C4DH72 117 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 FABP7O15540 132 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 TXNL1O43396 289 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 AMY1AP04745 511 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 AMY2AP04746 511 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 GSTP1P09211 210 aaKnown RBP12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 GSTT2P0CG29 244 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 GSTT2BP0CG30 244 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 TMEM11P17152 192 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 CD1BP29016 333 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 OR3A3P47888 321 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 SERPINB10P48595 397 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 VBP1P61758 197 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 ZNF260Q3ZCT1 412 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 HACD4Q5VWC8 232 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 OR4A4PQ8NGN8 299 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 SGMS2Q8NHU3 365 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 MAFIPQ8WZ33 124 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 PHF21AQ96BD5 680 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 SLC25A38Q96DW6 304 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 EAF1Q96JC9 268 aaPredicted RBP12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 CITED1Q99966 193 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 PARP12Q9H0J9 701 aaKnown RBP12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 C11orf54Q9H0W9 315 aaPredicted RBP12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 SERTAD4Q9NUC0 356 aa12.94□□□□□ -0.34
SSSCA1-202ENST00000526433 ZNF736B4DX44 427 aaPredicted RBP12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 ITGB1BP1O14713 200 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 TFAP2AP05549 437 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 ALDH3B2P48448 385 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 KIR2DS1Q14954 304 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 SRSF7Q16629 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 ABCA11PQ4W5N1 156 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 ARSJQ5FYB0 599 aaPredicted RBP12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 ANKRD13BQ86YJ7 626 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 IZUMO1Q8IYV9 350 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 OR2T10Q8NGZ9 312 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 NAA50Q9GZZ1 169 aaKnown RBP12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 MOB4Q9Y3A3 225 aa12.93□□□□□ -0.34
SSSCA1-202ENST00000526433 TRAV18A0A075B6X5 111 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 TMEM235A6NFC5 223 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 SH2D7A6NKC9 451 aaPredicted RBP12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 M0QZK8 103 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 VSIG10L2P0DP72 767 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 PITPNAQ00169 270 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 HERPUD1Q15011 391 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 PNLIPRP3Q17RR3 467 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 IGSF11Q5DX21 431 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 GPR107Q5VW38 600 aa12.92□□□□□ -0.34
SSSCA1-202ENST00000526433 Q6ZS49 121 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms