RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ABRACLQ9P1F3 81 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 GHRLQ9UBU3 117 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 DAPK2Q9UIK4 370 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 MRPS28Q9Y2Q9 187 aaKnown RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 MRPS7Q9Y2R9 242 aaKnown RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 POLDIP2Q9Y2S7 368 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 ARFGEF3Q5TH69 2177 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 CHD6Q8TD26 2715 aa3.67□□□□□ -1.82
USP48-211ENST00000526044 SPTBN1Q01082 2364 aaKnown RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 UBR5O95071 2799 aaPredicted RBP3.67□□□□□ -1.82
USP48-211ENST00000526044 TRAV6A0A075B6T7 132 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 PPIAL4EA0A075B759 164 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 TRAV38-1A0A0B4J264 116 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 METTL21EPA6NDL7 271 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SMIM1B2RUZ4 78 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 PPIAL4DF5H284 164 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 AIPO00170 330 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SH2D1BO14796 132 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SYNGR1O43759 233 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 ANGPTL7O43827 346 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SSX4O60224 188 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 NOS1APO75052 506 aaPredicted RBP3.66□□□□□ -1.82
USP48-211ENST00000526044 CRTAPO75718 401 aaPredicted RBP3.66□□□□□ -1.82
USP48-211ENST00000526044 LY6HO94772 140 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 NXPH2O95156 264 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 CYB5R3P00387 301 aaPredicted RBP3.66□□□□□ -1.82
USP48-211ENST00000526044 LHBP01229 141 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 CFC1BP0CG36 223 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 CFC1P0CG37 223 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 UBBP0CG47 229 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 PGA5P0DJD9 388 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 PPIAL4FP0DN26 164 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SLC2A2P11168 524 aaPredicted RBP3.66□□□□□ -1.82
USP48-211ENST00000526044 BCL3P20749 454 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SERPINA2P20848 420 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 GLRA1P23415 457 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 MPZP25189 248 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 CDKN1BP46527 198 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 OR3A4PP47883 348 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 NPBWR2P48146 333 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 ATP5J2P56134 94 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 CLDN12P56749 244 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 P2RY14Q15391 338 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 FAM189A2Q15884 450 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 CARTPTQ16568 116 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 MICBQ29980 383 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 ZNF181Q2M3W8 571 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 Q3ZCU0 254 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SLC22A6Q4U2R8 563 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 TMEM41BQ5BJD5 291 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 FAM166AQ6J272 317 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SFXN4Q6P4A7 337 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 WDR82Q6UXN9 313 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 BIVMQ86UB2 503 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 Q8IYB0 196 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 FAM58AQ8N1B3 248 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 STPG4Q8N801 248 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 DEFB108BQ8NET1 73 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 BPIFCQ8NFQ6 507 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 OR4D6Q8NGJ1 314 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 OR51T1Q8NGJ9 327 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 KCNG3Q8TAE7 436 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 DYNC2LI1Q8TCX1 351 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 LRRC29Q8WV35 223 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 ACOT12Q8WYK0 555 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 AP3S1Q92572 193 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 RAB1CQ92928 201 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 YIPF5Q969M3 257 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SLC25A46Q96AG3 418 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 FAM3DQ96BQ1 224 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 MRPS24Q96EL2 167 aaKnown RBP3.66□□□□□ -1.82
USP48-211ENST00000526044 CEP19Q96LK0 163 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 LURAP1Q96LR2 239 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 ZNF488Q96MN9 340 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 NKX3-1Q99801 234 aaPredicted RBP3.66□□□□□ -1.82
USP48-211ENST00000526044 MAGT1Q9H0U3 335 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 CST11Q9H112 138 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 RHOFQ9HBH0 211 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 SPACA1Q9HBV2 294 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 MYOZ1Q9NP98 299 aaPredicted RBP3.66□□□□□ -1.82
USP48-211ENST00000526044 TMEM106BQ9NUM4 274 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 IL36GQ9NZH8 169 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 MTCH1Q9NZJ7 389 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 GLS2Q9UI32 602 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 RAB22AQ9UL26 194 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 GPR132Q9UNW8 380 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 ST3GAL6Q9Y274 331 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 PPIAL4AQ9Y536 164 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 NPTNQ9Y639 398 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 CACNG2Q9Y698 323 aa3.66□□□□□ -1.82
USP48-211ENST00000526044 TANC2Q9HCD6 1990 aa3.65□□□□□ -1.82
USP48-211ENST00000526044 IGHV3OR15-7A0A075B7D8 119 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 IGKV1-12A0A0C4DH73 117 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 TMEM14DPA8MWL7 114 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 SRRM5B3KS81 715 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 CLDN25C9JDP6 229 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 F8VVB4 439 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 F8VWA3 439 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 DEGS1O15121 323 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 PPIHO43447 177 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms