RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 OR3A3P47888 321 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 NDPQ00604 133 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 AWAT2Q6E213 333 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 ARPC1AQ92747 370 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 GHSRQ92847 366 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 SLC29A1Q99808 456 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 KCNIP1Q9NZI2 227 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 KIAA1456Q9P272 454 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 JPT1Q9UK76 154 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 FBXO7Q9Y3I1 522 aa18.51■□□□□ 0.55
USP47-205ENST00000525257 IGHV4OR15-8A0A075B7B6 117 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 A0A087WW49 117 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 SOX15O60248 233 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 CA11O75493 328 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 GPX5O75715 221 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 SC5DO75845 299 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 SRSF7Q16629 238 aaKnown RBP eCLIP18.5■□□□□ 0.55
USP47-205ENST00000525257 OR6Q1Q8NGQ2 317 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 C9orf16Q9BUW7 83 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 TOLLIPQ9H0E2 274 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 MBNL3Q9NUK0 354 aaKnown RBP18.5■□□□□ 0.55
USP47-205ENST00000525257 BABAM2Q9NXR7 383 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 A3GALT2U3KPV4 340 aa18.5■□□□□ 0.55
USP47-205ENST00000525257 LCE6AA0A183 80 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 A0A1W2PPK0 400 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 MGMTP16455 207 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 DCKP27707 260 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 Q499Y3 187 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 ZFAND6Q6FIF0 208 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 ZFP1Q6P2D0 407 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 ACSM6Q6P461 480 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 ZNF833PQ6ZTB9 187 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 ZFP41Q8N8Y5 198 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 NPBQ8NG41 125 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 CST11Q9H112 138 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 GHITMQ9H3K2 345 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 ERGIC3Q9Y282 383 aa18.49■□□□□ 0.55
USP47-205ENST00000525257 SAA2-SAA4A0A096LPE2 208 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 WBP4O75554 376 aaKnown RBP18.48■□□□□ 0.55
USP47-205ENST00000525257 CRTAPO75718 401 aaPredicted RBP18.48■□□□□ 0.55
USP47-205ENST00000525257 NDUFA3O95167 84 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 MAS1P04201 325 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 LGALS1P09382 135 aaKnown RBP18.48■□□□□ 0.55
USP47-205ENST00000525257 SAA2P0DJI9 122 aaPredicted RBP18.48■□□□□ 0.55
USP47-205ENST00000525257 FSTP19883 344 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 FUT3P21217 361 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 C19orf54Q5BKX5 351 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 SIGIRRQ6IA17 410 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 MRPL30Q8TCC3 161 aaKnown RBP18.48■□□□□ 0.55
USP47-205ENST00000525257 Q96M66 194 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 RDH12Q96NR8 316 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 CITED4Q96RK1 184 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 CLEC2DQ9UHP7 191 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 FOXA2Q9Y261 457 aaPredicted RBP18.48■□□□□ 0.55
USP47-205ENST00000525257 BIRC6Q9NR09 4857 aa18.48■□□□□ 0.55
USP47-205ENST00000525257 FAM90A7PA6NKC0 464 aa18.47■□□□□ 0.55
USP47-205ENST00000525257 FAM90A23PA8MXZ1 464 aa18.47■□□□□ 0.55
USP47-205ENST00000525257 OR8U9P0C7N5 309 aa18.47■□□□□ 0.55
USP47-205ENST00000525257 RPS11P62280 158 aaKnown RBP eCLIP18.47■□□□□ 0.55
USP47-205ENST00000525257 DMKNQ6E0U4 476 aaPredicted RBP18.47■□□□□ 0.55
USP47-205ENST00000525257 ABHD5Q8WTS1 349 aa18.47■□□□□ 0.55
USP47-205ENST00000525257 OR14A2Q96R54 314 aa18.47■□□□□ 0.55
USP47-205ENST00000525257 FBXL15Q9H469 300 aa18.47■□□□□ 0.55
USP47-205ENST00000525257 TPSG1Q9NRR2 321 aa18.47■□□□□ 0.55
USP47-205ENST00000525257 YPEL1O60688 119 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 IGHV3-11P01762 117 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 GLAP06280 429 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 MYL12AP19105 171 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 HTD2P86397 168 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 PITPNAQ00169 270 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 LRRC36Q1X8D7 754 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 YIF1BQ5BJH7 314 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 FAM131AQ6UXB0 335 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 ZNF554Q86TJ5 538 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 HAPLN4Q86UW8 402 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 OR2AK2Q8NG84 335 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 YPEL2Q96QA6 119 aa18.46■□□□□ 0.55
USP47-205ENST00000525257 TRBV5-7A0A0A0MS05 114 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 PDCD6O75340 191 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 RGS11O94810 467 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 CRIP2P52943 208 aaPredicted RBP18.45■□□□□ 0.54
USP47-205ENST00000525257 CX3CL1P78423 397 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 PLGLAQ15195 96 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 ZNF660Q6AZW8 331 aaPredicted RBP18.45■□□□□ 0.54
USP47-205ENST00000525257 FAM46BQ96A09 425 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 PGLYRP3Q96LB9 341 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 OR4C12Q96R67 309 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 FAM53CQ9NYF3 392 aa18.45■□□□□ 0.54
USP47-205ENST00000525257 DIMT1Q9UNQ2 313 aaKnown RBP18.45■□□□□ 0.54
USP47-205ENST00000525257 EXOSC1Q9Y3B2 195 aaKnown RBP18.45■□□□□ 0.54
USP47-205ENST00000525257 BAG2O95816 211 aa18.44■□□□□ 0.54
USP47-205ENST00000525257 GALMQ96C23 342 aa18.44■□□□□ 0.54
USP47-205ENST00000525257 TM2D3Q9BRN9 247 aa18.44■□□□□ 0.54
USP47-205ENST00000525257 IFI27L2Q9H2X8 130 aa18.44■□□□□ 0.54
USP47-205ENST00000525257 PNMA8CA0A1B0GUJ8 204 aa18.43■□□□□ 0.54
USP47-205ENST00000525257 IRGMA1A4Y4 181 aa18.43■□□□□ 0.54
USP47-205ENST00000525257 FCN1O00602 326 aa18.43■□□□□ 0.54
USP47-205ENST00000525257 RRHO14718 337 aa18.43■□□□□ 0.54
USP47-205ENST00000525257 ST8SIA5O15466 376 aa18.43■□□□□ 0.54
USP47-205ENST00000525257 CAPGP40121 348 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms