RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 OR10K1Q8NGX5 313 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 OR11H2Q8NH07 326 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 LINC01006Q8NI28 216 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 PDXPQ96GD0 296 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 ZNF414Q96IQ9 312 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 MARVELD1Q9BSK0 173 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 THTPAQ9BU02 230 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 GTSF1LQ9H1H1 148 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 IFI27L2Q9H2X8 130 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 SND1-IT1Q9HBX3 110 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 C14orf105Q9NVL8 296 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 DNAJC12Q9UKB3 198 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 PXMP4Q9Y6I8 212 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 PRSS21Q9Y6M0 314 aa3.81□□□□□ -1.8
USP47-204ENST00000525078 SMARCA2P51531 1590 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 PEG3Q9GZU2 1588 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 SCN2AQ99250 2005 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 NOS1P29475 1434 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 IGHV7-4-1A0A0J9YVY3 117 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 FAM236DA0A1B0GTK5 79 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 A0A1B0GVX0 72 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 EXOC1LA0A1B0GW35 172 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 H0YJW9 148 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 DHFRP00374 187 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 CRYGDP07320 174 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 GUSBP08236 651 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 SULT1A3P0DMM9 295 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 SULT1A4P0DMN0 295 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 FAM236CP0DP71 79 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 FGF6P10767 208 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 IFI30P13284 250 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 KLK2P20151 261 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 IGLV3-21P80748 117 aaPredicted RBP3.8□□□□□ -1.8
USP47-204ENST00000525078 SMCO1Q147U7 214 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 TEX30Q5JUR7 227 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 SBSNQ6UWP8 590 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 C5orf46Q6UWT4 87 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 DPPA2Q7Z7J5 298 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 OOSP2Q86WS3 158 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 PHF13Q86YI8 300 aaPredicted RBP3.8□□□□□ -1.8
USP47-204ENST00000525078 TMEM35BQ8NCS4 154 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 OR8S1Q8NH09 359 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 OR10A6Q8NH74 314 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 LHFPL5Q8TAF8 219 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 REEP6Q96HR9 211 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 NRTNQ99748 197 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 MED28Q9H204 178 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 CISHQ9NSE2 258 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 CMTM6Q9NX76 183 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 MRPL27Q9P0M9 148 aaKnown RBP3.8□□□□□ -1.8
USP47-204ENST00000525078 SYNMO15061 1565 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 SYNJ1O43426 1573 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 TET2Q6N021 2002 aaPredicted RBP3.8□□□□□ -1.8
USP47-204ENST00000525078 MAP3K1Q13233 1512 aa3.8□□□□□ -1.8
USP47-204ENST00000525078 ZNFX1Q9P2E3 1918 aaKnown RBP3.8□□□□□ -1.8
USP47-204ENST00000525078 RRBP1Q9P2E9 1410 aaKnown RBP3.79□□□□□ -1.8
USP47-204ENST00000525078 PIKFYVEQ9Y2I7 2098 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 A0A087WYN8 130 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 IGHV3-49A0A0A0MS15 119 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 ZNF850A8MQ14 1090 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 A8MWL6 223 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 GPR31O00270 319 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 SOCS1O15524 211 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 ZNF806P0C7X5 589 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 S100GP29377 79 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 MPIP34949 423 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 FABP9Q0Z7S8 132 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 IL17AQ16552 155 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 LINC00303Q3SY05 128 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 RNASE13Q5GAN3 156 aaKnown RBP3.79□□□□□ -1.8
USP47-204ENST00000525078 MRPL2Q5T653 305 aaKnown RBP3.79□□□□□ -1.8
USP47-204ENST00000525078 HES3Q5TGS1 186 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 EBLN2Q6P2I7 272 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 YIPF7Q8N8F6 280 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 Q8N976 141 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 OR10G2Q8NGC3 310 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 OR2T27Q8NH04 317 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 ABHD14BQ96IU4 210 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 TBX5Q99593 518 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 KLF6Q99612 283 aaPredicted RBP3.79□□□□□ -1.8
USP47-204ENST00000525078 AIF1LQ9BQI0 150 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 GINS3Q9BRX5 216 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 MIXL1Q9H2W2 232 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 RPP21Q9H633 154 aaKnown RBP3.79□□□□□ -1.8
USP47-204ENST00000525078 RSL24D1Q9UHA3 163 aaKnown RBP3.79□□□□□ -1.8
USP47-204ENST00000525078 PYCARDQ9ULZ3 195 aa3.79□□□□□ -1.8
USP47-204ENST00000525078 PLCH2O75038 1416 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 ATRNO75882 1429 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 DHX57Q6P158 1386 aaKnown RBP3.78□□□□□ -1.8
USP47-204ENST00000525078 SMARCA4P51532 1647 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 IGHV1-45A0A0A0MS14 117 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 IGKV1-6A0A0C4DH72 117 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 hADV38S2A0JD32 116 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 NKX2-6A6NCS4 301 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 KNCNA6PVL3 124 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 C4orf51C9J302 202 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 C11orf94C9JXX5 98 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 INMT-MINDY4F8WBC2 141 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 BPY2O14599 106 aa3.78□□□□□ -1.8
USP47-204ENST00000525078 DEDDO75618 318 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms