RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RELBQ01201 579 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 IL18Q14116 193 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 HES1Q14469 280 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 HABP2Q14520 560 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 PNLIPRP3Q17RR3 467 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 LRRC75BQ2VPJ9 315 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 Q3ZCU0 254 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 FAAP20Q6NZ36 180 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 TRAT1Q6PIZ9 186 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 Q6ZS46 218 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 SLC25A48Q6ZT89 311 aaKnown RBP3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 MOB1BQ7L9L4 216 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 HOGA1Q86XE5 327 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 LYSMD2Q8IV50 215 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 ODF3L1Q8IXM7 274 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 TEX29Q8N6K0 151 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 BEND2Q8NDZ0 799 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 BEST4Q8NFU0 473 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 OR52M1Q8NGK5 317 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 OR52I2Q8NH67 350 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 OR10J5Q8NHC4 309 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF596Q8TC21 504 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 SSMEM1Q8WWF3 244 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 ACOT12Q8WYK0 555 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 AP3S1Q92572 193 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 RPEQ96AT9 228 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 MALSU1Q96EH3 234 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 C5orf30Q96GV9 206 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 DIRAS2Q96HU8 199 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 RITA1Q96K30 269 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 YPEL2Q96QA6 119 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 OCSTAMPQ9BR26 566 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 GINS4Q9BRT9 223 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 ABHD14AQ9BUJ0 271 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 C19orf24Q9BVV8 132 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 MRPL20Q9BYC9 149 aaKnown RBP3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 C11orf54Q9H0W9 315 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 MEGF9Q9H1U4 602 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 OR2D2Q9H210 308 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 IFI27L2Q9H2X8 130 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 RIMS4Q9H426 269 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 IFT46Q9NQC8 304 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 ABCB10Q9NRK6 738 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 KLK11Q9UBX7 282 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 JPT1Q9UK76 154 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 TBL2Q9Y4P3 447 aaKnown RBP3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 RBM7Q9Y580 266 aaKnown RBP3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 ABCA1O95477 2261 aa3.7□□□□□ -1.82
CHMP4A-202ENST00000524955 NF1P21359 2839 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 TRBV6-7A0A0A0MS04 114 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 IGKV1D-13A0A0B4J2D9 117 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 IGHV1-3A0A0C4DH29 117 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 LINC00854A0A1B0GVQ3 168 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 A6NDX4 124 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 BTBD17A6NE02 478 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 TRIM77I1YAP6 450 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 M0R1X1 148 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 TNFSF12O43508 249 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 LANCL1O43813 399 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 SCGNO76038 276 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 IGKV1D-33P01593 117 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 IGKV1-33P01594 117 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 GAPDHP04406 335 aaKnown RBP3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 IGKV1-13P0DP09 117 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 MDKP21741 143 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 AADACP22760 399 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 DTYMKP23919 212 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 ZBTB25P24278 435 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 CNTFRP26992 372 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 CEACAM3P40198 252 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 RANBP1P43487 201 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 KIR2DS4P43632 304 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 BPIFB3P59826 476 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 BLCAPP62952 87 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 HTD2P86397 168 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 PITPNAQ00169 270 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 SRSF4Q08170 494 aaKnown RBP3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 SCGB2A2Q13296 93 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 KIR2DS1Q14954 304 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 TUSC1Q2TAM9 212 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 CNPY1Q3B7I2 92 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 TMEM95Q3KNT9 176 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 OR2B11Q5JQS5 317 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 C9orf152Q5JTZ5 239 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 MINOS1Q5TGZ0 78 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 C16orf87Q6PH81 154 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 FAM131AQ6UXB0 335 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 TMEM17Q86X19 198 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 TGIF2LXQ8IUE1 241 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 H1FOOQ8IZA3 346 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 OR2AK2Q8NG84 335 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 OR10A7Q8NGE5 316 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 OR4D10Q8NGI6 311 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 OR4A4PQ8NGN8 299 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 GPX8Q8TED1 209 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 RTN4IP1Q8WWV3 396 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 CFHR4Q92496 578 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 ST6GALNAC6Q969X2 333 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 DGCR14Q96DF8 476 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms