RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 METTL9Q9H1A3 318 aa8.82□□□□□ -1
SDCBP-211ENST00000523441 RIBC2Q9H4K1 309 aa8.82□□□□□ -1
SDCBP-211ENST00000523441 SIGLEC8Q9NYZ4 499 aa8.82□□□□□ -1
SDCBP-211ENST00000523441 RNF150Q9ULK6 438 aa8.82□□□□□ -1
SDCBP-211ENST00000523441 NUBP2Q9Y5Y2 271 aa8.82□□□□□ -1
SDCBP-211ENST00000523441 KIAA1109Q2LD37 5005 aa8.82□□□□□ -1
SDCBP-211ENST00000523441 SAA2-SAA4A0A096LPE2 208 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 UBE2QL1A1L167 161 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 OR11H12B2RN74 326 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 RRHO14718 337 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 DCTN3O75935 186 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 CA2P00918 260 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 RPSAP08865 295 aaKnown RBP8.81□□□□□ -1
SDCBP-211ENST00000523441 SAA2P0DJI9 122 aaPredicted RBP8.81□□□□□ -1
SDCBP-211ENST00000523441 APELAP0DMC3 54 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 EWSR1Q01844 656 aaKnown RBP eCLIP8.81□□□□□ -1
SDCBP-211ENST00000523441 PAX5Q02548 391 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 SLC22A6Q4U2R8 563 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 MORN2Q502X0 79 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 C6orf183Q5T699 404 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 ODF3L1Q8IXM7 274 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 TCTEX1D1Q8N7M0 179 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 NPBQ8NG41 125 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 GATAD1Q8WUU5 269 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 ORAI1Q96D31 301 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 PELI1Q96FA3 418 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 CPNE2Q96FN4 548 aaPredicted RBP8.81□□□□□ -1
SDCBP-211ENST00000523441 SLA2Q9H6Q3 261 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 TAF9BQ9HBM6 251 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 ZNF446Q9NWS9 450 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 SLC2A8Q9NY64 477 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 METTL1Q9UBP6 276 aaKnown RBP8.81□□□□□ -1
SDCBP-211ENST00000523441 ARL2BPQ9Y2Y0 163 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 KMT2AQ03164 3969 aa8.81□□□□□ -1
SDCBP-211ENST00000523441 A0A0J9YWU9 116 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 NUPR2A6NF83 97 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 AQP12BA6NM10 295 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 MCRIP1C9JLW8 97 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 ST8SIA5O15466 376 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 NDUFA3O95167 84 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 CCR9P51686 369 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 KLF5Q13887 457 aaPredicted RBP8.8□□□□□ -1
SDCBP-211ENST00000523441 FLOT2Q14254 428 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 RPEL1Q2QD12 228 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 RPL39P5Q59GN2 51 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 DDI2Q5TDH0 399 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 LINC00322Q6ZN03 302 aaPredicted RBP8.8□□□□□ -1
SDCBP-211ENST00000523441 LHFPL3Q86UP9 236 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 AQP12AQ8IXF9 295 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 OR5AK2Q8NH90 309 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 DYNLRB2Q8TF09 96 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 RFKQ969G6 155 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 PARP12Q9H0J9 701 aaKnown RBP8.8□□□□□ -1
SDCBP-211ENST00000523441 ISG20L2Q9H9L3 353 aaKnown RBP8.8□□□□□ -1
SDCBP-211ENST00000523441 FAM53CQ9NYF3 392 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 SLC23A1Q9UHI7 598 aa8.8□□□□□ -1
SDCBP-211ENST00000523441 E9PI62 339 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 G3V2T6 193 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 ARPC1BO15143 372 aaKnown RBP8.79□□□□□ -1
SDCBP-211ENST00000523441 MAS1P04201 325 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 TFAP2AP05549 437 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 TATDN3Q17R31 274 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 Q3ZCU0 254 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 CD300EQ496F6 205 aaPredicted RBP8.79□□□□□ -1
SDCBP-211ENST00000523441 AKIRIN2Q53H80 203 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 RAB12Q6IQ22 244 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 FDX2Q6P4F2 183 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 CD200R1LQ6Q8B3 271 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 PARP16Q8N5Y8 322 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 POC5Q8NA72 575 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 CIB1Q99828 191 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 RAB9BQ9NP90 201 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 KCNIP1Q9NZI2 227 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 PEF1Q9UBV8 284 aaKnown RBP8.79□□□□□ -1
SDCBP-211ENST00000523441 AASSQ9UDR5 926 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 PEX16Q9Y5Y5 336 aa8.79□□□□□ -1
SDCBP-211ENST00000523441 EDN2P20800 178 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 ZNF93P35789 620 aaPredicted RBP8.78□□□□□ -1
SDCBP-211ENST00000523441 CRIP2P52943 208 aaPredicted RBP8.78□□□□□ -1
SDCBP-211ENST00000523441 GYS2P54840 703 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 MPV17LQ2QL34 196 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 CEMP1Q6PRD7 247 aaPredicted RBP8.78□□□□□ -1
SDCBP-211ENST00000523441 ZNF833PQ6ZTB9 187 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 KCTD20Q7Z5Y7 419 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 DRAXINQ8NBI3 349 aaPredicted RBP8.78□□□□□ -1
SDCBP-211ENST00000523441 OR2AK2Q8NG84 335 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 IL1F10Q8WWZ1 152 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 NRBF2Q96F24 287 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 ALG8Q9BVK2 526 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 BANF2Q9H503 90 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 IFT22Q9H7X7 185 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 COA4Q9NYJ1 87 aa8.78□□□□□ -1
SDCBP-211ENST00000523441 A0A0G2JLM5 398 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 BAG2O95816 211 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 FADS2O95864 444 aaKnown RBP8.77□□□□□ -1.01
SDCBP-211ENST00000523441 GTF2F2P13984 249 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 RIPK1Q13546 671 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 FXYD3Q14802 87 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 PSG5Q15238 335 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 KDM4DQ6B0I6 523 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms