RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 LIMS3P0CW19 117 aa17.46■□□□□ 0.39
PVT1-218ENST00000523328 LIMS4P0CW20 117 aa17.46■□□□□ 0.39
PVT1-218ENST00000523328 RAB12Q6IQ22 244 aa17.46■□□□□ 0.39
PVT1-218ENST00000523328 ZNF833PQ6ZTB9 187 aa17.46■□□□□ 0.39
PVT1-218ENST00000523328 C5orf24Q7Z6I8 188 aa17.46■□□□□ 0.39
PVT1-218ENST00000523328 MBNL3Q9NUK0 354 aaKnown RBP17.46■□□□□ 0.39
PVT1-218ENST00000523328 ERGIC3Q9Y282 383 aa17.46■□□□□ 0.39
PVT1-218ENST00000523328 IGLV1-51P01701 117 aa17.45■□□□□ 0.38
PVT1-218ENST00000523328 HSPB1P04792 205 aaKnown RBP17.45■□□□□ 0.38
PVT1-218ENST00000523328 EGR2P11161 476 aaPredicted RBP17.45■□□□□ 0.38
PVT1-218ENST00000523328 IGFBP3P17936 291 aaPredicted RBP17.45■□□□□ 0.38
PVT1-218ENST00000523328 PPP1CCP36873 323 aaKnown RBP17.45■□□□□ 0.38
PVT1-218ENST00000523328 GPR176Q14439 515 aa17.45■□□□□ 0.38
PVT1-218ENST00000523328 CCDC58Q4VC31 144 aa17.45■□□□□ 0.38
PVT1-218ENST00000523328 ZNF660Q6AZW8 331 aaPredicted RBP17.45■□□□□ 0.38
PVT1-218ENST00000523328 RPL22L1Q6P5R6 122 aaKnown RBP17.45■□□□□ 0.38
PVT1-218ENST00000523328 TCTEX1D1Q8N7M0 179 aa17.45■□□□□ 0.38
PVT1-218ENST00000523328 MRPS18AQ9NVS2 196 aaKnown RBP17.45■□□□□ 0.38
PVT1-218ENST00000523328 KIAA1456Q9P272 454 aa17.45■□□□□ 0.38
PVT1-218ENST00000523328 NKX1-2Q9UD57 310 aaPredicted RBP17.45■□□□□ 0.38
PVT1-218ENST00000523328 JPT1Q9UK76 154 aa17.45■□□□□ 0.38
PVT1-218ENST00000523328 NUBP2Q9Y5Y2 271 aa17.45■□□□□ 0.38
PVT1-218ENST00000523328 CA11O75493 328 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 IGHV3-11P01762 117 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 OR3A3P47888 321 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 CX3CL1P78423 397 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 RIPK1Q13546 671 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 LRRC36Q1X8D7 754 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 RHOXF1Q8NHV9 184 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 FLYWCH2Q96CP2 140 aaKnown RBP17.44■□□□□ 0.38
PVT1-218ENST00000523328 MRPS24Q96EL2 167 aaKnown RBP17.44■□□□□ 0.38
PVT1-218ENST00000523328 SPATA25Q9BR10 227 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 PEX16Q9Y5Y5 336 aa17.44■□□□□ 0.38
PVT1-218ENST00000523328 SAA2-SAA4A0A096LPE2 208 aa17.43■□□□□ 0.38
PVT1-218ENST00000523328 SAA2P0DJI9 122 aaPredicted RBP17.43■□□□□ 0.38
PVT1-218ENST00000523328 ALDH3A2P51648 485 aa17.43■□□□□ 0.38
PVT1-218ENST00000523328 PLECQ15149 4684 aaKnown RBP17.43■□□□□ 0.38
PVT1-218ENST00000523328 ZNF554Q86TJ5 538 aa17.43■□□□□ 0.38
PVT1-218ENST00000523328 SGPP2Q8IWX5 399 aa17.43■□□□□ 0.38
PVT1-218ENST00000523328 OR13C5Q8NGS8 318 aa17.43■□□□□ 0.38
PVT1-218ENST00000523328 FBXL15Q9H469 300 aa17.43■□□□□ 0.38
PVT1-218ENST00000523328 STUB1Q9UNE7 303 aa17.43■□□□□ 0.38
PVT1-218ENST00000523328 A3GALT2U3KPV4 340 aa17.43■□□□□ 0.38
PVT1-218ENST00000523328 FCN1O00602 326 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 YPEL1O60688 119 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 HTD2P86397 168 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 LY6G6FQ5SQ64 297 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 SIGIRRQ6IA17 410 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 PYHIN1Q6K0P9 492 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 CD200R1LQ6Q8B3 271 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 MUL1Q969V5 352 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 RHOVQ96L33 236 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 Q96MT0 163 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 YPEL2Q96QA6 119 aa17.42■□□□□ 0.38
PVT1-218ENST00000523328 RRHO14718 337 aa17.41■□□□□ 0.38
PVT1-218ENST00000523328 GPX5O75715 221 aa17.41■□□□□ 0.38
PVT1-218ENST00000523328 HAGHQ16775 308 aa17.41■□□□□ 0.38
PVT1-218ENST00000523328 GLIPR1L1Q6UWM5 242 aa17.41■□□□□ 0.38
PVT1-218ENST00000523328 MRPL30Q8TCC3 161 aaKnown RBP17.41■□□□□ 0.38
PVT1-218ENST00000523328 ELOVL1Q9BW60 279 aa17.41■□□□□ 0.38
PVT1-218ENST00000523328 BANF2Q9H503 90 aa17.41■□□□□ 0.38
PVT1-218ENST00000523328 KCNIP1Q9NZI2 227 aa17.41■□□□□ 0.38
PVT1-218ENST00000523328 TRAV8-7A0A075B6U6 113 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 TRBV5-5A0A0J9YX44 114 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 UBE2QL1A1L167 161 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 FAM90A7PA6NKC0 464 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 FAM90A23PA8MXZ1 464 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 ARPC1BO15143 372 aaKnown RBP17.4■□□□□ 0.38
PVT1-218ENST00000523328 OGG1O15527 345 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 MAS1P04201 325 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 GLAP06280 429 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 FUT3P21217 361 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 TMEM267Q0VDI3 215 aaPredicted RBP17.4■□□□□ 0.38
PVT1-218ENST00000523328 ACTBL2Q562R1 376 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 OR2G6Q5TZ20 316 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 FAM131AQ6UXB0 335 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 PYDC1Q8WXC3 89 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 SMIM19Q96E16 107 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 MS4A10Q96PG2 267 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 FAM103A1Q9BTL3 118 aaKnown RBP17.4■□□□□ 0.38
PVT1-218ENST00000523328 RSRP1Q9BUV0 290 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 IFI27L2Q9H2X8 130 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 GAB2Q9UQC2 676 aa17.4■□□□□ 0.38
PVT1-218ENST00000523328 RPL36Q9Y3U8 105 aaKnown RBP17.4■□□□□ 0.38
PVT1-218ENST00000523328 ETV1P50549 477 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 TPPP2P59282 170 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 AKIRIN2Q53H80 203 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 FAM71F2Q6NXP2 309 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 PPP1R27Q86WC6 154 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 ANKRD13BQ86YJ7 626 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 APH1BQ8WW43 257 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 Q96M66 194 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 RDH12Q96NR8 316 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 SELENOIQ9C0D9 397 aa17.39■□□□□ 0.37
PVT1-218ENST00000523328 FGF20Q9NP95 211 aaPredicted RBP17.39■□□□□ 0.37
PVT1-218ENST00000523328 CNOT2Q9NZN8 540 aaKnown RBP17.39■□□□□ 0.37
PVT1-218ENST00000523328 RGS11O94810 467 aa17.38■□□□□ 0.37
PVT1-218ENST00000523328 ARSBP15848 533 aa17.38■□□□□ 0.37
PVT1-218ENST00000523328 MGMTP16455 207 aa17.38■□□□□ 0.37
PVT1-218ENST00000523328 FSTP19883 344 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms