RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 MFNGO00587 321 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 NDUFB3O43676 98 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 ZNF345Q14585 488 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 Q6ZPA2 131 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 TMEM17Q86X19 198 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 BPIFCQ8NFQ6 507 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 MRGPRFQ96AM1 343 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 SDSLQ96GA7 329 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 SEC22AQ96IW7 307 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 RCC2Q9P258 522 aaKnown RBP10.25□□□□□ -0.77
PABPC1-219ENST00000522387 CLN8Q9UBY8 286 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 ZNF107Q9UII5 783 aaPredicted RBP10.25□□□□□ -0.77
PABPC1-219ENST00000522387 VSIG4Q9Y279 399 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 ABCA1O95477 2261 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 A0A0A6YYH2 397 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 A6NJ64 397 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 LTC4SQ16873 150 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 LRRC10Q5BKY1 277 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 MRGPRDQ8TDS7 321 aa10.25□□□□□ -0.77
PABPC1-219ENST00000522387 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 FAM74A7A6NL05 159 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 CYSRT1A8MQ03 144 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 TNFRSF13BO14836 293 aaPredicted RBP10.24□□□□□ -0.77
PABPC1-219ENST00000522387 SMAD7O15105 426 aaKnown RBP10.24□□□□□ -0.77
PABPC1-219ENST00000522387 IGHV3-7P01780 117 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 WNT2P09544 360 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 LMO1P25800 156 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 ZFP36P26651 326 aaKnown RBP10.24□□□□□ -0.77
PABPC1-219ENST00000522387 ARHGDIBP52566 201 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 GNB2P62879 340 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 MEF2DQ14814 521 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 FAM74A3Q4VXF1 159 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 ZNF841Q6ZN19 808 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 LYG2Q86SG7 212 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 LINC00596Q86U02 117 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 KRTAP1-3Q8IUG1 177 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 CIARTQ8N365 385 aaPredicted RBP10.24□□□□□ -0.77
PABPC1-219ENST00000522387 CLRN3Q8NCR9 226 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 OR8B3Q8NGG8 313 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 RFESDQ8TAC1 157 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 PPP1R1CQ8WVI7 109 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 NARS2Q96I59 477 aaKnown RBP10.24□□□□□ -0.77
PABPC1-219ENST00000522387 OR8B2Q96RD0 313 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 TRAPPC2LQ9UL33 140 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 SONP18583 2426 aaKnown RBP10.24□□□□□ -0.77
PABPC1-219ENST00000522387 MPTX1A8MV57 137 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 FAM25EA8MYX2 175 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 ZBTB25P24278 435 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 GLP1RP43220 463 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 RNASE10Q5GAN6 216 aaKnown RBP10.24□□□□□ -0.77
PABPC1-219ENST00000522387 FAM53AQ6NSI3 398 aaPredicted RBP10.24□□□□□ -0.77
PABPC1-219ENST00000522387 ACOT7LQ6ZUV0 252 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 SLC25A42Q86VD7 318 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 SNX22Q96L94 193 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 SPACA1Q9HBV2 294 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 C19orf12Q9NSK7 152 aa10.24□□□□□ -0.77
PABPC1-219ENST00000522387 IGKV1D-8A0A087WSZ0 117 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A10PA6NDY2 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A18PA6NE21 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A16PA6NEW6 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A20PA6NIJ5 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A8PA6NJQ4 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A7PA6NKC0 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A22PA8MWA6 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A12PA8MX19 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A5PA8MXJ8 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A23PA8MXZ1 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM157AC9JC47 383 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 SDCBPO00560 298 aaPredicted RBP10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A15PP0C7V4 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A13PP0C7W8 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A14PP0C7W9 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM90A24PP0C7X0 464 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 PAX1P15863 534 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 SSTR5P35346 364 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 RPL31P62899 125 aaKnown RBP10.23□□□□□ -0.77
PABPC1-219ENST00000522387 PPP1R1AQ13522 171 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 RBM39Q14498 530 aaKnown RBP10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM189A2Q15884 450 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 FAM185AQ8N0U4 392 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 OR13A1Q8NGR1 328 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 IL1F10Q8WWZ1 152 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 NEIL1Q96FI4 390 aaPredicted RBP10.23□□□□□ -0.77
PABPC1-219ENST00000522387 PRRT1Q99946 306 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 SSBP3Q9BWW4 388 aaPredicted RBP10.23□□□□□ -0.77
PABPC1-219ENST00000522387 NKX6-2Q9C056 277 aaPredicted RBP10.23□□□□□ -0.77
PABPC1-219ENST00000522387 PATZ1Q9HBE1 687 aaKnown RBP10.23□□□□□ -0.77
PABPC1-219ENST00000522387 MIOXQ9UGB7 285 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 HSF4Q9ULV5 492 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.23□□□□□ -0.778e-7■■■■□ 25.6
PABPC1-219ENST00000522387 NDUFA2O43678 99 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 IGHV2-5P01817 119 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 CCL3L1P16619 93 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 PI3P19957 117 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 LMO4P61968 165 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 TMEM155Q4W5P6 130 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 WDR25Q64LD2 544 aaPredicted RBP10.23□□□□□ -0.77
PABPC1-219ENST00000522387 NINJ1Q92982 152 aa10.23□□□□□ -0.77
PABPC1-219ENST00000522387 MARC2Q969Z3 335 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms