RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SULT4A1Q9BR01 284 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 CHCHD6Q9BRQ6 235 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 FAAP24Q9BTP7 215 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 ABHD14AQ9BUJ0 271 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 MRPL20Q9BYC9 149 aaKnown RBP9.71□□□□□ -0.86
CSMD1-205ENST00000519623 CST11Q9H112 138 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 KLK15Q9H2R5 256 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 ZMAT5Q9UDW3 170 aaKnown RBP9.71□□□□□ -0.86
CSMD1-205ENST00000519623 ZNF107Q9UII5 783 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-205ENST00000519623 SCOCQ9UIL1 159 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 JPT1Q9UK76 154 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 ERGIC3Q9Y282 383 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 LRRC42Q9Y546 428 aa9.71□□□□□ -0.86
CSMD1-205ENST00000519623 RAMP3O60896 148 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 UBBP0CG47 229 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 HTR2CP28335 458 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 LUMP51884 338 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-205ENST00000519623 ACTBP60709 375 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 RPS27AP62979 156 aaKnown RBP9.7□□□□□ -0.86
CSMD1-205ENST00000519623 QRFPP83859 136 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 FHL3Q13643 280 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 MMDQ15546 238 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 HMGN3Q15651 99 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 NKAPLQ5M9Q1 402 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 ZNF833PQ6ZTB9 187 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 C6orf201Q7Z4U5 140 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 MS4A15Q8N5U1 240 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 OR5M8Q8NGP6 311 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 PHYHIPQ92561 330 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 GALMQ96C23 342 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 LSM2Q9Y333 95 aaKnown RBP9.7□□□□□ -0.86
CSMD1-205ENST00000519623 LSM4Q9Y4Z0 139 aaKnown RBP9.7□□□□□ -0.86
CSMD1-205ENST00000519623 WSB1Q9Y6I7 421 aa9.7□□□□□ -0.86
CSMD1-205ENST00000519623 IGHV7-81A0A0B4J1V7 117 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 G3V318 75 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 RGS11O94810 467 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 NAPSAO96009 420 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 IGLV1-40P01703 118 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 HLA-DRB1P01911 266 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 CDK1P06493 297 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 OR5H8P0DN80 308 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 SRMP19623 302 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 MYF6P23409 242 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 GABPB1Q06547 395 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-205ENST00000519623 UNC119Q13432 240 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 GLT8D1Q68CQ7 371 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 ZNF880Q6PDB4 577 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 ZNF491Q8N8L2 437 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 NPBQ8NG41 125 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 OR11H1Q8NG94 326 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 SORL1Q92673 2214 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 UBE2E2Q96LR5 201 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 NEDD4LQ96PU5 975 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 ZNF251Q9BRH9 671 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 NICN1Q9BSH3 213 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 TM2D1Q9BX74 207 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 ANKRD60Q9BZ19 345 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 OR51J1Q9H342 316 aa9.69□□□□□ -0.86
CSMD1-205ENST00000519623 SAA2-SAA4A0A096LPE2 208 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 A0A0A6YYD4 124 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 TMEM14DPA8MWL7 114 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 PTGES3LE9PB15 166 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 I3L521 148 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 SLC22A1O15245 554 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 NBR2O15453 112 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 SAA2P0DJI9 122 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-205ENST00000519623 RUNX1Q01196 453 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 DCTN2Q13561 401 aaKnown RBP9.68□□□□□ -0.86
CSMD1-205ENST00000519623 SPHARQ15513 63 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 C5orf64Q2M2E5 130 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 C9orf66Q5T8R8 295 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 LIN54Q6MZP7 749 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 CEACAM19Q7Z692 300 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 MINDY2Q8NBR6 621 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 KCNG3Q8TAE7 436 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 TMED9Q9BVK6 235 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 MND1Q9BWT6 205 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 TMEM59Q9BXS4 323 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 IFI27L2Q9H2X8 130 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 KCNK15Q9H427 330 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 GNB4Q9HAV0 340 aa9.68□□□□□ -0.86
CSMD1-205ENST00000519623 SEC14L6B5MCN3 397 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 ATP6V0E1O15342 81 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 NDUFA3O95167 84 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 UCHL1P09936 223 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 CT45A6P0DMU7 189 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 CT45A5P0DMU8 189 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 CT45A7P0DMV0 189 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 BLVRBP30043 206 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-205ENST00000519623 RAB9AP51151 201 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 IRF3Q14653 427 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 RBM48Q5RL73 367 aaKnown RBP9.67□□□□□ -0.86
CSMD1-205ENST00000519623 ASPHD1Q5U4P2 390 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 SVOPQ8N4V2 548 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 FAM89BQ8N5H3 189 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 OR2AK2Q8NG84 335 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 OR1N2Q8NGR9 330 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 IL1F10Q8WWZ1 152 aa9.67□□□□□ -0.86
CSMD1-205ENST00000519623 PRR25Q96S07 402 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms