RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 C9orf139Q6ZV77 190 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 H1FOOQ8IZA3 346 aaPredicted RBP7.73□□□□□ -1.17
CLN8-203ENST00000518780 PNKDQ8N490 385 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 OR52L2PQ8NGH6 319 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 MAFIPQ8WZ33 124 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 LHX4Q969G2 390 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 TRIM63Q969Q1 353 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 TSC22D3Q99576 134 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 C7orf50Q9BRJ6 194 aaKnown RBP7.73□□□□□ -1.17
CLN8-203ENST00000518780 SUCNR1Q9BXA5 334 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 MMP28Q9H239 520 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 SIRT7Q9NRC8 400 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 RDH8Q9NYR8 311 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 PIPOXQ9P0Z9 390 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 ZNF69Q9UC07 566 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 GAB2Q9UQC2 676 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 OR2W1Q9Y3N9 320 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 HIVEP1P15822 2718 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 ACANP16112 2415 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 ABCA1O95477 2261 aa7.73□□□□□ -1.17
CLN8-203ENST00000518780 AKAP9Q99996 3911 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 NAP1L6A6NFF2 107 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 CENPXA8MT69 81 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 LEUTXA8MZ59 168 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 DISC1C4P0D8 188 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 RAB29O14966 203 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 NPFFO15130 113 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 TXNL1O43396 289 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 RAB3DO95716 219 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 AVPP01185 164 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 CD3DP04234 171 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 IL7P13232 177 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 EPHA1P21709 976 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 PPP1CCP36873 323 aaKnown RBP7.72□□□□□ -1.17
CLN8-203ENST00000518780 ECI1P42126 302 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 LUMP51884 338 aaPredicted RBP7.72□□□□□ -1.17
CLN8-203ENST00000518780 ZNF137PP52743 207 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 TSPAN5P62079 268 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 KLF9Q13886 244 aaPredicted RBP7.72□□□□□ -1.17
CLN8-203ENST00000518780 BAK1Q16611 211 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 LTC4SQ16873 150 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 HLA-DRB5Q30154 266 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 CT45A1Q5HYN5 189 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 CCDC144NLQ6NUI1 221 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 FAM71F2Q6NXP2 309 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 C1orf229Q6ZS94 237 aaPredicted RBP7.72□□□□□ -1.17
CLN8-203ENST00000518780 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.72□□□□□ -1.17
CLN8-203ENST00000518780 ZNF439Q8NDP4 499 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 CT45A3Q8NHU0 189 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 MALSU1Q96EH3 234 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 SDHCQ99643 169 aaPredicted RBP7.72□□□□□ -1.17
CLN8-203ENST00000518780 AGMATQ9BSE5 352 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 ABHD14AQ9BUJ0 271 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 SLC2A8Q9NY64 477 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 EHFQ9NZC4 300 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 DPM3Q9P2X0 92 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 SCP2D1Q9UJQ7 156 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 VPS13CQ709C8 3753 aa7.72□□□□□ -1.17
CLN8-203ENST00000518780 HIVEP2P31629 2446 aa7.71□□□□□ -1.17
CLN8-203ENST00000518780 DOCK11Q5JSL3 2073 aa7.71□□□□□ -1.17
CLN8-203ENST00000518780 TRAV40A0A0B4J280 105 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 BUB1B-PAK6H3BSN5 160 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 LANCL1O43813 399 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 PPYP01298 95 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 PMP2P02689 132 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 ARG1P05089 322 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 FCER2P06734 321 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 COX7A1P24310 79 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 FCGR2CP31995 323 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 SRP14P37108 136 aaKnown RBP7.71□□□□□ -1.18
CLN8-203ENST00000518780 RFX2P48378 723 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 ARHGDIBP52566 201 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 UCP3P55916 312 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 AANATQ16613 207 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 RNASE12Q5GAN4 147 aaKnown RBP7.71□□□□□ -1.18
CLN8-203ENST00000518780 KLF17Q5JT82 389 aaPredicted RBP7.71□□□□□ -1.18
CLN8-203ENST00000518780 ZNF660Q6AZW8 331 aaPredicted RBP7.71□□□□□ -1.18
CLN8-203ENST00000518780 ZBTB34Q8NCN2 500 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 OR10V1Q8NGI7 309 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 OR10X1Q8NGY0 326 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 TERB2Q8NHR7 220 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 UBALD1Q8TB05 177 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 SCGB3A2Q96PL1 93 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 S1PR3Q99500 378 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 PRRT1Q99946 306 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 BEX2Q9BXY8 128 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 MS4A7Q9GZW8 240 aaPredicted RBP7.71□□□□□ -1.18
CLN8-203ENST00000518780 C11orf54Q9H0W9 315 aaPredicted RBP7.71□□□□□ -1.18
CLN8-203ENST00000518780 PALMDQ9NP74 551 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 OR1A1Q9P1Q5 309 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 ZNF221Q9UK13 617 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 ZANQ9Y493 2812 aa7.71□□□□□ -1.18
CLN8-203ENST00000518780 ABCA2Q9BZC7 2435 aa7.7□□□□□ -1.18
CLN8-203ENST00000518780 CR1P17927 2039 aa7.7□□□□□ -1.18
CLN8-203ENST00000518780 IGHV3-43A0A0B4J1X8 118 aa7.7□□□□□ -1.18
CLN8-203ENST00000518780 FAM172BPA6NC97 362 aa7.7□□□□□ -1.18
CLN8-203ENST00000518780 UPK1BO75841 260 aa7.7□□□□□ -1.18
CLN8-203ENST00000518780 GAPDHP04406 335 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms