RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TRAV10A0A0B4J240 114 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 A0A0J9YXY3 114 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 IQCF5A8MTL0 148 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 H0Y980 276 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 CCL22O00626 93 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 MRPS12O15235 138 aaKnown RBP2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ACOX3O15254 700 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 NUPL2O15504 423 aaKnown RBP2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ENTPD5O75356 428 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 HSBP1O75506 76 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 HBE1P02100 147 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 SEMG1P04279 462 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 SLC35E2BP0CK96 405 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 GGT2P36268 569 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 CSNK1A1P48729 337 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 SERPINB8P50452 374 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 RND2P52198 227 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 APOC4P55056 127 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 TAS2R19P59542 299 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 STXBP1P61764 594 aaKnown RBP2.17□□□□□ -2.06
CPNE3-204ENST00000517862 SLC35B1P78383 322 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 IGLV3-21P80748 117 aaPredicted RBP2.17□□□□□ -2.06
CPNE3-204ENST00000517862 TNFAIP6P98066 277 aaPredicted RBP2.17□□□□□ -2.06
CPNE3-204ENST00000517862 PITPNAQ00169 270 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF616Q08AN1 781 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF726P1Q15940 193 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 FAM83EQ2M2I3 478 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF404Q494X3 552 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 PAGE3Q5JUK9 113 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ATAD3CQ5T2N8 411 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 DEGS2Q6QHC5 323 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 MDP1Q86V88 176 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 APRG1Q8IVJ8 170 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 IQCF2Q8IXL9 164 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ST13P4Q8IZP2 240 aaPredicted RBP2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ARRDC1Q8N5I2 433 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 TBC1D19Q8N5T2 526 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 CD177Q8N6Q3 437 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ATP6V1C2Q8NEY4 427 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 OR4D6Q8NGJ1 314 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 OR13C9Q8NGT0 318 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 OR10R2Q8NGX6 335 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 NDNFQ8TB73 568 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 LRRC20Q8TCA0 184 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ZFP90Q8TF47 636 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 C4orf3Q8WVX3 66 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 BAALCQ8WXS3 180 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 C11orf40Q8WZ69 217 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 IL22RA2Q969J5 263 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 IMP4Q96G21 291 aaKnown RBP2.17□□□□□ -2.06
CPNE3-204ENST00000517862 ARHGDIGQ99819 225 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 GGTLC1Q9BX51 225 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 GFRA4Q9GZZ7 299 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 WFDC10AQ9H1F0 79 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 SPNS1Q9H2V7 528 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 OR51J1Q9H342 316 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 TREM1Q9NP99 234 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 IFNKQ9P0W0 207 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 DCDC2Q9UHG0 476 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 BTNL2Q9UIR0 455 aa2.17□□□□□ -2.06
CPNE3-204ENST00000517862 VGLL3A8MV65 326 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 GOLGA8KD6RF30 607 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 SMKR1H3BMG3 65 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 GABRPO00591 440 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 POLR3GO15318 223 aaPredicted RBP2.16□□□□□ -2.06
CPNE3-204ENST00000517862 GMDSO60547 372 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 MPDU1O75352 247 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 SNAPINO95295 136 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 UTS2O95399 124 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 LSM8O95777 96 aaKnown RBP2.16□□□□□ -2.06
CPNE3-204ENST00000517862 ARG1P05089 322 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 GKN3PP0CG01 181 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 CCL2P13500 99 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 ZP3P21754 424 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 IL12BP29460 328 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 EVI2BP34910 448 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 SERPINB5P36952 375 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 CCNG1P51959 295 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 NCBP2P52298 156 aaKnown RBP eCLIP2.16□□□□□ -2.06
CPNE3-204ENST00000517862 FGF8P55075 233 aaPredicted RBP2.16□□□□□ -2.06
CPNE3-204ENST00000517862 BIKQ13323 160 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 ARFRP1Q13795 201 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 KIAA0087Q14695 138 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 TBC1D28Q2M2D7 210 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 Q6ZRU5 148 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 TMEM179BQ7Z7N9 219 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 CBLN2Q8IUK8 224 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF615Q8N8J6 731 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 NKAPP1Q8N9T2 125 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 OR13C4Q8NGS5 318 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 TNFRSF14Q92956 283 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 MARC2Q969Z3 335 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 FCRL1Q96LA6 429 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 SERPINB12Q96P63 405 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF317Q96PQ6 595 aaPredicted RBP2.16□□□□□ -2.06
CPNE3-204ENST00000517862 UQCC2Q9BRT2 126 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 PAXXQ9BUH6 204 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 SNRNP25Q9BV90 132 aaKnown RBP2.16□□□□□ -2.06
CPNE3-204ENST00000517862 OSBPL10Q9BXB5 764 aa2.16□□□□□ -2.06
CPNE3-204ENST00000517862 SLCO1B3Q9NPD5 702 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms