RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 UPK3BQ9BT76 320 aa1.16□□□□□ -2.22
SKP1-203ENST00000517625 MED10Q9BTT4 135 aa1.16□□□□□ -2.22
SKP1-203ENST00000517625 MND1Q9BWT6 205 aa1.16□□□□□ -2.22
SKP1-203ENST00000517625 ASCL3Q9NQ33 180 aa1.16□□□□□ -2.22
SKP1-203ENST00000517625 LINC00527Q9UJ94 153 aa1.16□□□□□ -2.22
SKP1-203ENST00000517625 A0A1W2PQL4 384 aaPredicted RBP1.15□□□□□ -2.23
SKP1-203ENST00000517625 TMEM213A2RRL7 107 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 GRIFINA4D1Z8 144 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 ERICH4A6NGS2 130 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 C9J4A7 227 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 HSBP1L1C9JCN9 74 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 OVOL1O14753 267 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 CRYGDP07320 174 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 P0DMU3 169 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 FAM231AP0DMU4 169 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 FAM231CP0DMU5 169 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 SYT1P21579 422 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 AGTR1P30556 359 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 KDELR2P33947 212 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 OPRM1P35372 400 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 OR1E2P47887 323 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 PSMB3P49720 205 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 FGF12P61328 243 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 PDGFRLQ15198 375 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 MRPL51Q4U2R6 128 aaKnown RBP1.15□□□□□ -2.23
SKP1-203ENST00000517625 PCOTHQ58A44 107 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 CLEC6AQ6EIG7 209 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 Q6ZRU5 148 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 CCDC121Q6ZUS5 278 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 SYCE1Q8N0S2 351 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 C2orf73Q8N5S3 287 aaPredicted RBP1.15□□□□□ -2.23
SKP1-203ENST00000517625 OR5C1Q8NGR4 320 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 TMEM56Q96MV1 263 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 TTTY12Q9BZ98 90 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 PSMD13Q9UNM6 376 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 SNX10Q9Y5X0 201 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 MYO16Q9Y6X6 1858 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 NAV3Q8IVL0 2385 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 NCOR2Q9Y618 2525 aa1.15□□□□□ -2.23
SKP1-203ENST00000517625 TENM4Q6N022 2769 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 GCN1Q92616 2671 aaKnown RBP1.14□□□□□ -2.23
SKP1-203ENST00000517625 COL18A1P39060 1754 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 OTOGLQ3ZCN5 2332 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 LRPPRCP42704 1394 aaKnown RBP1.14□□□□□ -2.23
SKP1-203ENST00000517625 IGHV3-73A0A0B4J1V6 119 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 MUC21A0A0G2JKD1 596 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 A0A0J9YX75 114 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 MUC21A0A140T8X8 626 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 MKRN2OSH3BPM6 223 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 GOLGA8RI6L899 631 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 STK16O75716 305 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 CDK14O94921 469 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 CDK2P24941 298 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 BSPH1Q075Z2 132 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 FOXF1Q12946 379 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 ANGPT1Q15389 498 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 TRMT12Q53H54 448 aaKnown RBP1.14□□□□□ -2.23
SKP1-203ENST00000517625 SPATA24Q86W54 205 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 YIPF7Q8N8F6 280 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 ATP6V1C2Q8NEY4 427 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 STOML3Q8TAV4 291 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 SUN5Q8TC36 379 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 TNFAIP8L1Q8WVP5 186 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 ABHD14BQ96IU4 210 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 TXNDC17Q9BRA2 123 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 MED18Q9BUE0 208 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 NKX6-2Q9C056 277 aaPredicted RBP1.14□□□□□ -2.23
SKP1-203ENST00000517625 EIF5A2Q9GZV4 153 aaKnown RBP1.14□□□□□ -2.23
SKP1-203ENST00000517625 CHMP4BQ9H444 224 aaKnown RBP1.14□□□□□ -2.23
SKP1-203ENST00000517625 METTL17Q9H7H0 456 aaPredicted RBP1.14□□□□□ -2.23
SKP1-203ENST00000517625 TREM1Q9NP99 234 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 C1orf109Q9NX04 203 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 GLS2Q9UI32 602 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 OR51B4Q9Y5P0 310 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 CRB1P82279 1406 aa1.14□□□□□ -2.23
SKP1-203ENST00000517625 NUP153P49790 1475 aaKnown RBP1.13□□□□□ -2.23
SKP1-203ENST00000517625 H3BPC8 53 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 MPZL2O60487 215 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 NEMFO60524 1076 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 SCN2BO60939 215 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 IGLV3-27P01718 113 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 CD7P09564 240 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 SLC25A16P16260 332 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 PVALBP20472 110 aaPredicted RBP1.13□□□□□ -2.23
SKP1-203ENST00000517625 F8A1P23610 371 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 DAD1P61803 113 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 SLAMF1Q13291 335 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 C1DQ13901 141 aaKnown RBP1.13□□□□□ -2.23
SKP1-203ENST00000517625 FAM45BPQ6NSW5 357 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 SCGB1D4Q6XE38 83 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 CRLF3Q8IUI8 442 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 OR10A6Q8NH74 314 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 ZNRF2Q8NHG8 242 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 FNDC9Q8TBE3 224 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 RNASEH2CQ8TDP1 164 aaKnown RBP1.13□□□□□ -2.23
SKP1-203ENST00000517625 C16orf78Q8WTQ4 265 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 OR7D2Q96RA2 312 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 MGLLQ99685 303 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 Q9BRP9 147 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms