RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 FAM234AQ9H0X4 552 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 METTL8Q9H825 291 aaKnown RBP7.57□□□□□ -1.2
CPNE4-213ENST00000515418 KCNS2Q9ULS6 477 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 TRGV10A0A0A0MS01 117 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 A0A1W2PPE3 182 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 A1L4Q6 167 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 NDUFB3O43676 98 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 ERP29P30040 261 aaKnown RBP7.57□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF134P52741 427 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 LOXL3P58215 753 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 LINC00205P59089 165 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 RAP2BP61225 183 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 LRRC37A5PQ49AS3 106 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 TMEM200BQ69YZ2 307 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 LYZL2Q7Z4W2 148 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 DRAXINQ8NBI3 349 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-213ENST00000515418 OR51H1Q8NH63 302 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 COQ8AQ8NI60 647 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 LHFPL5Q8TAF8 219 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 NINJ1Q92982 152 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF486Q96H40 463 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-213ENST00000515418 ABHD14BQ96IU4 210 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 CALYQ9NYX4 217 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 OR6C3Q9NZP0 311 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 GNG12Q9UBI6 72 aa7.57□□□□□ -1.2
CPNE4-213ENST00000515418 ABCA12Q86UK0 2595 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 KBTBD11-OT1A0A1B0GTJ5 212 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 ST8SIA5O15466 376 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 PPIHO43447 177 aaKnown RBP7.56□□□□□ -1.2
CPNE4-213ENST00000515418 HLA-GP17693 338 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 NFYBP25208 207 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 RPL31P62899 125 aaKnown RBP7.56□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF273Q14593 569 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 MORN2Q502X0 79 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 TRAT1Q6PIZ9 186 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 BTNL3Q6UXE8 466 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 CMTM1Q8IZ96 169 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 DRAM1Q8N682 238 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 CCDC71LQ8N9Z2 235 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 BVESQ8NE79 360 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 MSI2Q96DH6 328 aaKnown RBP7.56□□□□□ -1.2
CPNE4-213ENST00000515418 GALNT14Q96FL9 552 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 C5orf30Q96GV9 206 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 HYLS1Q96M11 299 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 OR2D2Q9H210 308 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 NARFLQ9H6Q4 476 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 RANBP3Q9H6Z4 567 aaPredicted RBP7.56□□□□□ -1.2
CPNE4-213ENST00000515418 GSKIPQ9P0R6 139 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 CLN8Q9UBY8 286 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 PSG11Q9UQ72 335 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 UBE2J1Q9Y385 318 aaPredicted RBP7.56□□□□□ -1.2
CPNE4-213ENST00000515418 PTPN13Q12923 2485 aa7.56□□□□□ -1.2
CPNE4-213ENST00000515418 DOPEY2Q9Y3R5 2298 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 A0A0B4J2A0 478 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 IGHV2-70P01814 119 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 CCL3L1P16619 93 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF16P17020 682 aaPredicted RBP7.55□□□□□ -1.2
CPNE4-213ENST00000515418 HTD2P86397 168 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 LRRC10Q5BKY1 277 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 PRAMEF5Q5TYX0 476 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 LIAT1Q6ZQX7 453 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 AGMATQ9BSE5 352 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 RAB18Q9NP72 206 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 SHPKQ9UHJ6 478 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 HSPB11Q9Y547 144 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 FBN2P35556 2912 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 TRAV14DV4A0A0A6YYC5 116 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 hADV38S2A0JD32 116 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 F2RL2O00254 374 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 SLC31A2O15432 143 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 KCNAB3O43448 404 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 CLDN1O95832 211 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 F2RP25116 425 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 RND3P61587 244 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 LGALSLQ3ZCW2 172 aaPredicted RBP7.55□□□□□ -1.2
CPNE4-213ENST00000515418 TMEM268Q5VZI3 342 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 GGNBP1Q5YKI7 109 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 GSG1LQ6UXU4 331 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 C1orf229Q6ZS94 237 aaPredicted RBP7.55□□□□□ -1.2
CPNE4-213ENST00000515418 FAM185AQ8N0U4 392 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 PPP1R1CQ8WVI7 109 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 NEU4Q8WWR8 484 aaPredicted RBP7.55□□□□□ -1.2
CPNE4-213ENST00000515418 RBMXL1Q96E39 390 aaKnown RBP7.55□□□□□ -1.2
CPNE4-213ENST00000515418 SUCNR1Q9BXA5 334 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 TMEM222Q9H0R3 208 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 NCOR1P1Q9H4R4 102 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 PLEKHF2Q9H8W4 249 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 ZNRD1Q9P1U0 126 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 KAAG1Q9UBP8 84 aa7.55□□□□□ -1.2
CPNE4-213ENST00000515418 NBPF19A0A087WUL8 3843 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 FXYD6-FXYD2A0A087WZ82 144 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 NDUFA2O43678 99 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 PROP1O75360 226 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 F12P00748 615 aaPredicted RBP7.54□□□□□ -1.2
CPNE4-213ENST00000515418 SSTR2P30874 369 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 RPL30P62888 115 aaKnown RBP7.54□□□□□ -1.2
CPNE4-213ENST00000515418 SRSF4Q08170 494 aaKnown RBP7.54□□□□□ -1.2
CPNE4-213ENST00000515418 CT45A1Q5HYN5 189 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 OR2B11Q5JQS5 317 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 SP5Q6BEB4 398 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms