RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 C10orf91Q5T1B1 145 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 TMEM108Q6UXF1 575 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CLEC18CQ8NCF0 446 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CT45A3Q8NHU0 189 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 MRGPRDQ8TDS7 321 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CYTL1Q9NRR1 136 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 CTHRC1Q96CG8 243 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 GFI1Q99684 422 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 SRP19P09132 144 aaKnown RBP11.4□□□□□ -0.58
TCOF1-213ENST00000514442 ZNF17P17021 662 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 BCL3P20749 454 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 USF1P22415 310 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-213ENST00000514442 COL10A1Q03692 680 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 WDR73Q6P4I2 378 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 OR8G5Q8NG78 346 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 TAAR6Q96RI8 345 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 P2RX4Q99571 388 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 AICDAQ9GZX7 198 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 GAL3ST2Q9H3Q3 398 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 HIF1ANQ9NWT6 349 aa11.4□□□□□ -0.58
TCOF1-213ENST00000514442 ANK1P16157 1881 aa11.4□□□□□ -0.59
TCOF1-213ENST00000514442 NYNRINQ9P2P1 1898 aaKnown RBP11.4□□□□□ -0.59
TCOF1-213ENST00000514442 CCDC88CQ9P219 2028 aa11.4□□□□□ -0.59
TCOF1-213ENST00000514442 TTRP02766 147 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 SLC25A6P12236 298 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 HINT1P49773 126 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-213ENST00000514442 RPEL1Q2QD12 228 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 LRRC10Q5BKY1 277 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 FFAR4Q5NUL3 377 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 SPTA1P02549 2419 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 CDIPTO14735 213 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 CHST1O43916 411 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 TIGITQ495A1 244 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 A0A1B0GWJ7 208 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 NKX2-6A6NCS4 301 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 TRDCB7Z8K6 153 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 SUB1P53999 127 aaKnown RBP eCLIP11.39□□□□□ -0.59
TCOF1-213ENST00000514442 SLC38A11Q08AI6 406 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 TMEM251Q8N6I4 163 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 OR2D3Q8NGH3 330 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 OR2J1Q9GZK6 312 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 CHD5Q8TDI0 1954 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-213ENST00000514442 EFEMP2O95967 443 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 MRPL30Q8TCC3 161 aaKnown RBP11.39□□□□□ -0.59
TCOF1-213ENST00000514442 RP1P56715 2156 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 HPRT1P00492 218 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 RUNX1Q01196 453 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 OR4A47Q6IF82 309 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 S100A7AQ86SG5 101 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 STARD10Q9Y365 291 aa11.39□□□□□ -0.59
TCOF1-213ENST00000514442 PIGYQ3MUY2 71 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 OR10G4Q8NGN3 311 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 OR10G9Q8NGN4 311 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 OR10G7Q8NGN6 311 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 R3HDM4Q96D70 268 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 H0YIZ8 118 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 GDF9O60383 454 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 COX6A1P12074 109 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 NUFIP2Q7Z417 695 aaKnown RBP11.38□□□□□ -0.59
TCOF1-213ENST00000514442 SOX7Q9BT81 388 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 SBF1O95248 1867 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 CACNA1EQ15878 2313 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 TRAV39A0A0B4J263 110 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 OR5B21A6NL26 309 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 IGHV2-5P01817 119 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 FAM157CP0CG43 387 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 CDCP2Q5VXM1 449 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 MOB3BQ86TA1 216 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 MDP1Q86V88 176 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 GPX7Q96SL4 187 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-213ENST00000514442 MIEN1Q9BRT3 115 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 TPPP3Q9BW30 176 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 AKIRIN1Q9H9L7 192 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-213ENST00000514442 ASCL3Q9NQ33 180 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 GLRX2Q9NS18 164 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 MPC1Q9Y5U8 109 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 TMEM210A6NLX4 147 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 FCGR3BO75015 233 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 MDH2P40926 338 aaKnown RBP11.38□□□□□ -0.59
TCOF1-213ENST00000514442 RPL11P62913 178 aaKnown RBP11.38□□□□□ -0.59
TCOF1-213ENST00000514442 OR1L6Q8NGR2 347 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 OR2D2Q9H210 308 aa11.38□□□□□ -0.59
TCOF1-213ENST00000514442 SRSF4Q08170 494 aaKnown RBP11.37□□□□□ -0.59
TCOF1-213ENST00000514442 SPINK9Q5DT21 86 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 LOXL4Q96JB6 756 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 CXXC4Q9H2H0 198 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 LOC102723971A0A1B0GUV8 181 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 CRYM-AS1A6NIL9 109 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 A6NNC1 897 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 LINC01590Q5TEZ4 76 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 FBXW9Q5XUX1 488 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 SLC23A3Q6PIS1 610 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 OR10G8Q8NGN5 311 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 LPAR5Q9H1C0 372 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 C11orf94C9JXX5 98 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 ZNF735P0CB33 412 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms