RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 GSG1LQ6UXU4 331 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 ZNF818PQ6ZRF7 136 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 LGI3Q8N145 548 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 ZNF645Q8N7E2 425 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 GFOD1Q9NXC2 390 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 KCNS2Q9ULS6 477 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 GAB2Q9UQC2 676 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 ICE1Q9Y2F5 2266 aa13.23□□□□□ -0.29
NUP54-214ENST00000514307 A8MV72 311 aaPredicted RBP13.22□□□□□ -0.29
NUP54-214ENST00000514307 LY6HO94772 140 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 SSTR2P30874 369 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 LOXL3P58215 753 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 LTC4SQ16873 150 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 Q3ZCU0 254 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 HEPN1Q6WQI6 88 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 ZNF841Q6ZN19 808 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 TBC1D26Q86UD7 250 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 TCTEX1D1Q8N7M0 179 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 IGFBPL1Q8WX77 278 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 DMRTB1Q96MA1 342 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 C19orf12Q9NSK7 152 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 CTSZQ9UBR2 303 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 RNF150Q9ULK6 438 aa13.22□□□□□ -0.29
NUP54-214ENST00000514307 NDUFS8O00217 210 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 PHF1O43189 567 aaPredicted RBP13.21□□□□□ -0.29
NUP54-214ENST00000514307 F2RP25116 425 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 NFYBP25208 207 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 EIF2B2P49770 351 aaKnown RBP13.21□□□□□ -0.29
NUP54-214ENST00000514307 DSCR9P59020 149 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 FGL1Q08830 312 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 TMEM187Q14656 261 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 WDR25Q64LD2 544 aaPredicted RBP13.21□□□□□ -0.29
NUP54-214ENST00000514307 LIAT1Q6ZQX7 453 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 LRTM2Q8N967 370 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 HYLS1Q96M11 299 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 PDCD10Q9BUL8 212 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 CHIAQ9BZP6 476 aa13.21□□□□□ -0.29
NUP54-214ENST00000514307 RPUSD1Q9UJJ7 312 aaKnown RBP13.21□□□□□ -0.29
NUP54-214ENST00000514307 FLNCQ14315 2725 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 PTPN13Q12923 2485 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 IGHV3-43A0A0B4J1X8 118 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 C13orf42A0A1B0GVH6 325 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 C5orf51A6NDU8 294 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 DBX1A6NMT0 343 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 C1QBP02746 253 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 SERPINE2P07093 398 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 IGHV3-43DP0DP04 118 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 GPR12P47775 334 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 GNB2P62879 340 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 SRSF4Q08170 494 aaKnown RBP13.2□□□□□ -0.3
NUP54-214ENST00000514307 CATR1Q13166 79 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 ESCO2Q56NI9 601 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 ZNF66Q6ZN08 573 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 ZNF695Q8IW36 515 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 DRAM1Q8N682 238 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.2□□□□□ -0.3
NUP54-214ENST00000514307 OR5M8Q8NGP6 311 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 FYTTD1Q96QD9 318 aaKnown RBP13.2□□□□□ -0.3
NUP54-214ENST00000514307 HSD17B10Q99714 261 aaKnown RBP13.2□□□□□ -0.3
NUP54-214ENST00000514307 TMEM222Q9H0R3 208 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 COMMD9Q9P000 198 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 PSG11Q9UQ72 335 aa13.2□□□□□ -0.3
NUP54-214ENST00000514307 CHD3Q12873 2000 aaKnown RBP13.19□□□□□ -0.3
NUP54-214ENST00000514307 PPIAL4CA0A0B4J2A2 164 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 MEX3AA1L020 520 aaKnown RBP13.19□□□□□ -0.3
NUP54-214ENST00000514307 FAM25EA8MYX2 175 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 H0Y980 276 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 NDUFS7O75251 213 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 ATG12O94817 140 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 RBP4P02753 201 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 OR5AC1P0C628 307 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 PPIAL4GP0DN37 164 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 OMGP23515 440 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 CD300CQ08708 224 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 GNMTQ14749 295 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 ANKRD55Q3KP44 614 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 SP6Q3SY56 376 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 NOXA1Q86UR1 476 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 ZNF295-AS1Q8N0V1 137 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 C8orf46Q8TAG6 207 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 CD300LFQ8TDQ1 290 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 GLYATL2Q8WU03 294 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 IL22RA2Q969J5 263 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 TMEM56Q96MV1 263 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 OR2D2Q9H210 308 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
NUP54-214ENST00000514307 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
NUP54-214ENST00000514307 PIPOXQ9P0Z9 390 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 TMED3Q9Y3Q3 217 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 TMEM56-RWDD3S4R434 201 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 HECTD1Q9ULT8 2610 aa13.19□□□□□ -0.3
NUP54-214ENST00000514307 ROS1P08922 2347 aa13.18□□□□□ -0.3
NUP54-214ENST00000514307 LOC105371242A0A075B767 164 aa13.18□□□□□ -0.3
NUP54-214ENST00000514307 DUXBA0A1W2PPF3 345 aa13.18□□□□□ -0.3
NUP54-214ENST00000514307 BOLA2-SMG1P6H3BVE0 249 aa13.18□□□□□ -0.3
NUP54-214ENST00000514307 RAB29O14966 203 aa13.18□□□□□ -0.3
NUP54-214ENST00000514307 LIPFP07098 398 aa13.18□□□□□ -0.3
NUP54-214ENST00000514307 PAX1P15863 534 aa13.18□□□□□ -0.3
NUP54-214ENST00000514307 ATP5J2P56134 94 aa13.18□□□□□ -0.3
NUP54-214ENST00000514307 FGFRL1Q8N441 504 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms