RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CD55P08174 381 aa5□□□□□ -1.61
TRAPPC11-209ENST00000512476 OR5H8P0DN80 308 aa5□□□□□ -1.61
TRAPPC11-209ENST00000512476 SLC2A2P11168 524 aaPredicted RBP5□□□□□ -1.61
TRAPPC11-209ENST00000512476 NCALDP61601 193 aa5□□□□□ -1.61
TRAPPC11-209ENST00000512476 SRSF4Q08170 494 aaKnown RBP5□□□□□ -1.61
TRAPPC11-209ENST00000512476 C1orf194Q5T5A4 169 aa5□□□□□ -1.61
TRAPPC11-209ENST00000512476 Q6ZSN1 163 aa5□□□□□ -1.61
TRAPPC11-209ENST00000512476 SLC30A7Q8NEW0 376 aa5□□□□□ -1.61
TRAPPC11-209ENST00000512476 CANT1Q8WVQ1 401 aa5□□□□□ -1.61
TRAPPC11-209ENST00000512476 ZNF300Q96RE9 604 aaPredicted RBP5□□□□□ -1.61
TRAPPC11-209ENST00000512476 TRIP12Q14669 1992 aaPredicted RBP5□□□□□ -1.61
TRAPPC11-209ENST00000512476 RALGAPA2Q2PPJ7 1873 aa5□□□□□ -1.61
TRAPPC11-209ENST00000512476 SPAARA0A1B0GVQ0 90 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 TRAPPC13A5PLN9 417 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 RENP00797 406 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 H2AFZP0C0S5 128 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 CHRNB4P30926 498 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 BIKQ13323 160 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 C1DQ13901 141 aaKnown RBP4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 DGAT2L6Q6ZPD8 337 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 H2AFVQ71UI9 128 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 KLHDC8BQ8IXV7 354 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 IFT20Q8IY31 132 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 ERG28Q9UKR5 140 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 LAMTOR2Q9Y2Q5 125 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 HES2Q9Y543 173 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 TRAV36DV7A0A075B6V5 113 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 TMEM272A0A1B0GTI8 110 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 TMEM189A5PLL7 270 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 LINC00271P0C7V0 271 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 KLK2P20151 261 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 BLVRBP30043 206 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 AMTP48728 403 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 ERVFC1-1P60608 527 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 P2RY6Q15077 328 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 TAF9Q16594 264 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 TSPO2Q5TGU0 170 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 CEACAM19Q7Z692 300 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 C1orf158Q8N1D5 194 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 FTMTQ8N4E7 242 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 RBMXL3Q8N7X1 1067 aaKnown RBP4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 OR6F1Q8NGZ6 308 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 C1orf54Q8WWF1 131 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 DCUN1D4Q92564 292 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 HIST1H2BAQ96A08 127 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 ZNF354BQ96LW1 612 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 DOHHQ9BU89 302 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 CXCL16Q9H2A7 254 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 CST9LQ9H4G1 147 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 MED11Q9P086 117 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 YTHDF2Q9Y5A9 579 aaKnown RBP4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 CITO14578 2027 aa4.99□□□□□ -1.61
TRAPPC11-209ENST00000512476 NKX2-6A6NCS4 301 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 FAM107AO95990 144 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 CLEC12BQ2HXU8 276 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 FAM201AQ5SY85 155 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 LDLRAD2Q5SZI1 272 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 ZNF550Q7Z398 422 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 CBR4Q8N4T8 237 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 KRTCAP2Q8N6L1 136 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 CHST4Q8NCG5 386 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 HSPB9Q9BQS6 159 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 LYRM2Q9NU23 88 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 INSL5Q9Y5Q6 135 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 PLAC8L1A1L4L8 177 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 C5orf63A6NC05 138 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 CORTO00230 105 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 SNRPCP09234 159 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 NPY1RP25929 384 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 LMO4P61968 165 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 HBG1P69891 147 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 HBG2P69892 147 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 REG3GQ6UW15 175 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 C6orf120Q7Z4R8 191 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 OR8I2Q8N0Y5 310 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 TMEM178AQ8NBL3 297 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 C11orf72Q8NBR9 251 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 ZNF114Q8NC26 417 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 OR4C6Q8NH72 309 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 DOCK6Q96HP0 2047 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 LYSMD1Q96S90 227 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 ZNF747Q9BV97 191 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 LINC00470Q9BZP3 86 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 RBM12B-AS1Q9P1G2 102 aa4.98□□□□□ -1.61
TRAPPC11-209ENST00000512476 OTOL1A6NHN0 477 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 MSGN1A6NI15 193 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 SAP18O00422 153 aaKnown RBP4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 TNFSF15O95150 251 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 PKIAP61925 76 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 RHEBQ15382 184 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 SIX1Q15475 284 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 RGNQ15493 299 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 ZFAND6Q6FIF0 208 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 OR5W2Q8NH69 310 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 MBD3L1Q8WWY6 194 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 C9orf85Q96MD7 179 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 GPR82Q96P67 336 aa4.97□□□□□ -1.61
TRAPPC11-209ENST00000512476 OR4K3Q96R72 315 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms